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																 [1 Image patch extract](#1-image-patch-extract)   
															
 
																 [2 Prediction](#2-prediction)  
															
 
																-[3 Heatmap stitching](3-heatmap-stitching)
															
 
																+[3 Heatmap stitching](#3-heatmap-stitching)
															
 
																 # 1 Image patch extract
															
 
																 The following commands launch Son of Grid Engine (SGE) jobs to extract, group patches in HDF5 files and create a lookup tables for every HDF5 file.