|
@@ -0,0 +1,17 @@
|
|
|
|
+TYPE=testing
|
|
|
|
+source ./config_generic.txt
|
|
|
|
+
|
|
|
|
+FILE_DIR=/scratch/wxc4/CAMELYON16-testing
|
|
|
|
+LISTFILE=list_testing.txt
|
|
|
|
+SPLIT_BASE_DIR=/scratch/mikem/UserSupport/weizhe.li/"$TYPE"_sg_"$PATCH_SIZE"_"$SPLIT_SIZE"
|
|
|
|
+LOOKUP_FILE="$SPLIT_BASE_DIR"/lookup.txt # cannot be csv extension
|
|
|
|
+NUM_HDF5_DS="$SPLIT_BASE_DIR"/num_hdf5_ds.txt
|
|
|
|
+export INDEX_DIR=/home/weizhe.li/li-code4hpc/pred_dim_0314/testing/patch_index
|
|
|
|
+
|
|
|
|
+
|
|
|
|
+# comes from config_generic.txt
|
|
|
|
+# PATCH_SIZE=448
|
|
|
|
+# SPLIT_SIZE=400
|
|
|
|
+# export PRED_SIZE=224
|
|
|
|
+# Model for color normalization
|
|
|
|
+# export MCN=/home/weizhe.li/Training/HNM_models/noise_norm/googlenetv1_norm_noise_0212_02.14.20_13:06_Vahadane-01-0.92.hdf5
|