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Rename dldp/dldp/heatmap_pred/split_grp.sh to dldp/dldp/heatmap_pred/HPC_SC20/split_grp.sh

Weizhe Li 5 years ago
parent
commit
ca43a05c02
1 changed files with 20 additions and 0 deletions
  1. 20 0
      split_grp.sh

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split_grp.sh

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+#$ -cwd
+#$ -A weizhe.li
+#$ -l h_rt=048:00:00
+#$ -S /bin/sh
+#$ -j y
+#                           $ -N split_grp comes from split_main.sh
+
+echo "Running $SGE_TASK_ID of job $JOB_ID on $HOSTNAME"
+
+source /projects/mikem/UserSupport/weizhe.li/split_wsi/set_env.sh
+
+# Get params
+# source ./config.txt
+source $1
+
+FILE=$(awk "NR==$SGE_TASK_ID" $LISTFILE)
+
+export PYTHONUNBUFFERED=TRUE
+PROG=split_grp.py
+time python $PROG $FILE_DIR $FILE $PATCH_SIZE $SPLIT_SIZE $SPLIT_BASE_DIR