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@@ -6,7 +6,7 @@
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# 1 Image patch extraction
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-- Adjust configuration parameters in files *config_testing.txt*, *config_normal.txt* and *config_tumor.txt*.
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+- Adjust configuration parameters in files *config_testing.txt*, *config_normal.txt* and *config_tumor.txt* located at the <a href="https://github.com/DIDSR/HPC_DPAI"> root </a> directory of the codes.
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- Run the commands listed in the following subsections to launch Son of Grid Engine (SGE) jobs to extract, group patches in HDF5 files and create a lookup table for every HDF5 file.
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## 1.1 Extract and group
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- qsub split_main.sh ./config_testing.txt
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Mike Mikailov