TYPE=tumor source ./config_generic.txt FILE_DIR=/scratch/wxc4/CAMELYON16-training/tumor LISTFILE=list_tumor.txt SPLIT_BASE_DIR=/scratch/mikem/UserSupport/weizhe.li/"$TYPE"_sg_"$PATCH_SIZE"_"$SPLIT_SIZE" LOOKUP_FILE="$SPLIT_BASE_DIR"/lookup.txt # cannot be csv extension NUM_HDF5_DS="$SPLIT_BASE_DIR"/num_hdf5_ds.txt export INDEX_DIR=/home/weizhe.li/li-code4hpc/pred_dim_0314/training-updated/tumor/patch_index # comes from config_generic.txt # PATCH_SIZE=448 # SPLIT_SIZE=400 # export PRED_SIZE=224 # Model for color normalization # export MCN=/home/weizhe.li/Training/HNM_models/noise_norm/googlenetv1_norm_noise_0212_02.14.20_13:06_Vahadane-01-0.92.hdf5