scatter.py 12 KB

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  1. """
  2. @package wxplot.scatter
  3. @brief Scatter plotting using PyPlot
  4. Classes:
  5. - scatter::ScatterFrame
  6. - scatter::ScatterToolbar
  7. (C) 2011 by the GRASS Development Team
  8. This program is free software under the GNU General Public License
  9. (>=v2). Read the file COPYING that comes with GRASS for details.
  10. @author Michael Barton, Arizona State University
  11. """
  12. import sys
  13. import wx
  14. from core.globalvar import CheckWxVersion
  15. try:
  16. if CheckWxVersion(version=[3, 0, 0]):
  17. import gui_core.wxlibplot as plot
  18. else:
  19. import wx.lib.plot as plot
  20. except ImportError as e:
  21. print >> sys.stderr, e
  22. import grass.script as grass
  23. from wxplot.base import BasePlotFrame, PlotIcons
  24. from gui_core.toolbars import BaseToolbar, BaseIcons
  25. from wxplot.dialogs import ScatterRasterDialog, PlotStatsFrame
  26. from core.gcmd import RunCommand, GException, GError, GMessage
  27. from core.utils import _
  28. class ScatterFrame(BasePlotFrame):
  29. """Mainframe for displaying bivariate scatter plot of two raster maps. Uses wx.lib.plot.
  30. """
  31. def __init__(self, parent, id = wx.ID_ANY, style = wx.DEFAULT_FRAME_STYLE,
  32. size = wx.Size(700, 400),
  33. rasterList = [], **kwargs):
  34. BasePlotFrame.__init__(self, parent, size = size, **kwargs)
  35. self.toolbar = ScatterToolbar(parent = self)
  36. # workaround for http://trac.wxwidgets.org/ticket/13888
  37. if sys.platform != 'darwin':
  38. self.SetToolBar(self.toolbar)
  39. self.SetTitle(_("GRASS Bivariate Scatterplot Tool"))
  40. #
  41. # Init variables
  42. #
  43. self.rasterList = rasterList
  44. self.plottype = 'scatter'
  45. self.ptitle = _('Bivariate Scatterplot') # title of window
  46. self.xlabel = _("Raster cell values") # default X-axis label
  47. self.ylabel = _("Raster cell values") # default Y-axis label
  48. self.maptype = 'raster' # default type of scatterplot
  49. self.scattertype = 'normal'
  50. self.bins = 255
  51. self.colorList = ["blue", "red", "black", "green", "yellow", "magenta", "cyan", \
  52. "aqua", "grey", "orange", "brown", "purple", "violet", \
  53. "indigo"]
  54. self._initOpts()
  55. if len(self.rasterList) > 1: # set raster name(s) from layer manager if a map is selected
  56. self.InitRasterOpts(self.rasterList, 'scatter')
  57. else:
  58. self.raster = {}
  59. def _initOpts(self):
  60. """Initialize plot options
  61. """
  62. self.InitPlotOpts('scatter')
  63. def OnCreateScatter(self, event):
  64. """Main routine for creating a scatterplot. Uses r.stats to
  65. create a list of cell value pairs. This is passed to
  66. plot to create a scatterplot.
  67. """
  68. self.SetCursor(wx.StockCursor(wx.CURSOR_ARROW))
  69. self.SetGraphStyle()
  70. wx.BeginBusyCursor()
  71. wx.SafeYield()
  72. self.SetupScatterplot()
  73. p = self.CreatePlotList()
  74. if p:
  75. self.DrawPlot(p)
  76. wx.EndBusyCursor()
  77. else:
  78. wx.EndBusyCursor()
  79. GMessage(_("Nothing to plot."), parent = self)
  80. def OnSelectRaster(self, event):
  81. """Select raster map(s) to profile
  82. """
  83. dlg = ScatterRasterDialog(parent = self)
  84. dlg.CenterOnParent()
  85. if dlg.ShowModal() == wx.ID_OK:
  86. self.rasterList = dlg.GetRasterPairs()
  87. if not self.rasterList:
  88. GMessage(_("At least 2 raster maps must be specified"), parent = dlg)
  89. return
  90. # scatterplot or bubbleplot
  91. # bins for r.stats with float and dcell maps
  92. self.scattertype, self.bins = dlg.GetSettings()
  93. self.raster = self.InitRasterPairs(self.rasterList, 'scatter') # dictionary of raster pairs
  94. # plot histogram
  95. if self.rasterList:
  96. self.OnCreateScatter(event = None)
  97. dlg.Destroy()
  98. def SetupScatterplot(self):
  99. """Build data list for ploting each raster
  100. """
  101. #
  102. # initialize title string
  103. #
  104. self.ptitle = _('Bivariate Scatterplot of ')
  105. #
  106. # create a datalist for plotting for each raster pair
  107. #
  108. if len(self.rasterList) == 0: return # at least 1 pair of maps needed to plot
  109. for rpair in self.rasterList:
  110. self.raster[rpair]['datalist'] = self.CreateDatalist(rpair)
  111. # update title
  112. self.ptitle += '%s vs %s, ' % (rpair[0].split('@')[0], rpair[1].split('@')[0])
  113. self.ptitle = self.ptitle.strip(', ')
  114. #
  115. # set xlabel & ylabel based on raster maps of first pair to be plotted
  116. #
  117. self.xlabel = _('Raster <%s> cell values') % rpair[0].split('@')[0]
  118. self.ylabel = _('Raster <%s> cell values') % rpair[1].split('@')[0]
  119. units = self.raster[self.rasterList[0]][0]['units']
  120. if units != '':
  121. self.xlabel += _(': %s') % units
  122. units = self.raster[self.rasterList[0]][1]['units']
  123. if units != '':
  124. self.ylabel += _(': %s') % units
  125. def CreateDatalist(self, rpair):
  126. """Build a list of cell value, frequency pairs for histogram
  127. frequency can be in cell counts, percents, or area
  128. """
  129. datalist = []
  130. if self.scattertype == 'bubble':
  131. freqflag = 'cn'
  132. else:
  133. freqflag = 'n'
  134. try:
  135. ret = RunCommand("r.stats",
  136. parent = self,
  137. input = '%s,%s' % rpair,
  138. flags = freqflag,
  139. nsteps = self.bins,
  140. sep = ',',
  141. quiet = True,
  142. read = True)
  143. if not ret:
  144. return datalist
  145. for line in ret.splitlines():
  146. rast1, rast2 = line.strip().split(',')
  147. rast1 = rast1.strip()
  148. if '-' in rast1:
  149. if rast1[0] == '-':
  150. rast1 = '-' + rast1.split('-')[1]
  151. else:
  152. rast1 = rast1.split('-')[0]
  153. rast2 = rast2.strip()
  154. if '-' in rast2:
  155. if rast2[0] == '-':
  156. rast2 = '-' + rast2.split('-')[1]
  157. else:
  158. rast2 = rast2.split('-')[0]
  159. rast1 = rast1.encode('ascii', 'ignore')
  160. rast2 = rast2.encode('ascii', 'ignore')
  161. datalist.append((rast1,rast2))
  162. return datalist
  163. except GException as e:
  164. GError(parent = self,
  165. message = e.value)
  166. return None
  167. def CreatePlotList(self):
  168. """Make list of elements to plot
  169. """
  170. # graph the cell value, frequency pairs for the histogram
  171. self.plotlist = []
  172. for rpair in self.rasterList:
  173. if 'datalist' not in self.raster[rpair] or \
  174. self.raster[rpair]['datalist'] is None:
  175. continue
  176. if len(self.raster[rpair]['datalist']) > 0:
  177. col = wx.Colour(self.raster[rpair]['pcolor'][0],
  178. self.raster[rpair]['pcolor'][1],
  179. self.raster[rpair]['pcolor'][2],
  180. 255)
  181. scatterpoints = plot.PolyMarker(self.raster[rpair]['datalist'],
  182. legend = ' ' + self.raster[rpair]['plegend'],
  183. colour = col,size = self.raster[rpair]['psize'],
  184. fillstyle = self.ptfilldict[self.raster[rpair]['pfill']],
  185. marker = self.raster[rpair]['ptype'])
  186. self.plotlist.append(scatterpoints)
  187. return self.plotlist
  188. def Update(self):
  189. """Update histogram after changing options
  190. """
  191. self.SetGraphStyle()
  192. p = self.CreatePlotList()
  193. if p:
  194. self.DrawPlot(p)
  195. else:
  196. GMessage(_("Nothing to plot."), parent = self)
  197. def OnRegression(self, event):
  198. """Displays regression information in messagebox
  199. """
  200. message = []
  201. title = _('Regression Statistics for Scatterplot(s)')
  202. for rpair in self.rasterList:
  203. if isinstance(rpair, tuple) == False: continue
  204. rast1, rast2 = rpair
  205. rast1 = rast1.split('@')[0]
  206. rast2 = rast2.split('@')[0]
  207. ret = grass.parse_command('r.regression.line',
  208. mapx = rast1,
  209. mapy = rast2,
  210. flags = 'g', quiet = True,
  211. parse = (grass.parse_key_val, { 'sep' : '=' }))
  212. eqtitle = _('Regression equation for raster map <%(rast1)s> vs. <%(rast2)s>:\n\n') % \
  213. { 'rast1' : rast1,
  214. 'rast2' : rast2 }
  215. eq = ' %s = %s + %s(%s)\n\n' % (rast2, ret['a'], ret['b'], rast1)
  216. num = 'N = %s\n' % ret['N']
  217. rval = 'R = %s\n' % ret['R']
  218. rsq = 'R-squared = %f\n' % pow(float(ret['R']), 2)
  219. ftest = 'F = %s\n' % ret['F']
  220. str = eqtitle + eq + num + rval + rsq + ftest
  221. message.append(str)
  222. stats = PlotStatsFrame(self, id = wx.ID_ANY, message = message,
  223. title = title)
  224. if stats.Show() == wx.ID_CLOSE:
  225. stats.Destroy()
  226. class ScatterToolbar(BaseToolbar):
  227. """Toolbar for bivariate scatterplots of raster map pairs
  228. """
  229. def __init__(self, parent):
  230. BaseToolbar.__init__(self, parent)
  231. # workaround for http://trac.wxwidgets.org/ticket/13888
  232. if sys.platform == 'darwin':
  233. parent.SetToolBar(self)
  234. self.InitToolbar(self._toolbarData())
  235. # realize the toolbar
  236. self.Realize()
  237. def _toolbarData(self):
  238. """Toolbar data"""
  239. return self._getToolbarData((('addraster', BaseIcons["addRast"],
  240. self.parent.OnSelectRaster),
  241. (None, ),
  242. ('draw', PlotIcons["draw"],
  243. self.parent.OnCreateScatter),
  244. ('erase', BaseIcons["erase"],
  245. self.parent.OnErase),
  246. ('drag', BaseIcons['pan'],
  247. self.parent.OnDrag),
  248. ('zoom', BaseIcons['zoomIn'],
  249. self.parent.OnZoom),
  250. ('unzoom', BaseIcons['zoomBack'],
  251. self.parent.OnRedraw),
  252. (None, ),
  253. ('statistics', PlotIcons['statistics'],
  254. self.parent.OnRegression),
  255. ('image', BaseIcons["saveFile"],
  256. self.parent.SaveToFile),
  257. ('print', BaseIcons["print"],
  258. self.parent.PrintMenu),
  259. (None, ),
  260. ('settings', PlotIcons["options"],
  261. self.parent.PlotOptionsMenu),
  262. ('quit', PlotIcons["quit"],
  263. self.parent.OnQuit),
  264. ))