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- """
- Core functions to be used in Python scripts.
- Usage:
- ::
- from grass.script import core as grass
- grass.parser()
- (C) 2008-2014 by the GRASS Development Team
- This program is free software under the GNU General Public
- License (>=v2). Read the file COPYING that comes with GRASS
- for details.
- .. sectionauthor:: Glynn Clements
- .. sectionauthor:: Martin Landa <landa.martin gmail.com>
- .. sectionauthor:: Michael Barton <michael.barton asu.edu>
- """
- from __future__ import absolute_import, print_function
- import os
- import sys
- import atexit
- import subprocess
- import shutil
- import codecs
- import types as python_types
- from .utils import KeyValue, parse_key_val, basename, encode
- from grass.exceptions import ScriptError, CalledModuleError
- # i18N
- import gettext
- gettext.install('grasslibs', os.path.join(os.getenv("GISBASE"), 'locale'))
- try:
- # python2
- import __builtin__
- from os import environ
- except ImportError:
- # python3
- import builtins as __builtin__
- from os import environb as environ
- unicode = str
- __builtin__.__dict__['_'] = __builtin__.__dict__['_'].__self__.lgettext
- # subprocess wrapper that uses shell on Windows
- class Popen(subprocess.Popen):
- _builtin_exts = set(['.com', '.exe', '.bat', '.cmd'])
- @staticmethod
- def _escape_for_shell(arg):
- # TODO: what are cmd.exe's parsing rules?
- return arg
- def __init__(self, args, **kwargs):
- if (sys.platform == 'win32'
- and isinstance(args, list)
- and not kwargs.get('shell', False)
- and kwargs.get('executable') is None):
- cmd = shutil_which(args[0])
- if cmd is None:
- raise OSError(_("Cannot find the executable {0}")
- .format(args[0]))
- args = [cmd] + args[1:]
- name, ext = os.path.splitext(cmd)
- if ext.lower() not in self._builtin_exts:
- kwargs['shell'] = True
- args = [self._escape_for_shell(arg) for arg in args]
- subprocess.Popen.__init__(self, args, **kwargs)
- PIPE = subprocess.PIPE
- STDOUT = subprocess.STDOUT
- raise_on_error = False # raise exception instead of calling fatal()
- _capture_stderr = False # capture stderr of subprocesses if possible
- def call(*args, **kwargs):
- return Popen(*args, **kwargs).wait()
- # GRASS-oriented interface to subprocess module
- _popen_args = ["bufsize", "executable", "stdin", "stdout", "stderr",
- "preexec_fn", "close_fds", "cwd", "env",
- "universal_newlines", "startupinfo", "creationflags"]
- def _make_val(val):
- """Convert value to bytes"""
- if isinstance(val, bytes):
- return val
- if isinstance(val, (str, unicode)):
- return encode(val)
- if isinstance(val, (int, float)):
- return encode(str(val))
- try:
- return b",".join(map(_make_val, iter(val)))
- except TypeError:
- pass
- return bytes(val)
- def get_commands():
- """Create list of available GRASS commands to use when parsing
- string from the command line
- :return: list of commands (set) and directory of scripts (collected
- by extension - MS Windows only)
- >>> cmds = list(get_commands()[0])
- >>> cmds.sort()
- >>> cmds[:5]
- ['d.barscale', 'd.colorlist', 'd.colortable', 'd.correlate', 'd.erase']
- """
- gisbase = os.environ['GISBASE']
- cmd = list()
- scripts = {'.py': list()} if sys.platform == 'win32' else {}
- def scan(gisbase, directory):
- dir_path = os.path.join(gisbase, directory)
- if os.path.exists(dir_path):
- for fname in os.listdir(os.path.join(gisbase, directory)):
- if scripts: # win32
- name, ext = os.path.splitext(fname)
- if ext != '.manifest':
- cmd.append(name)
- if ext in scripts.keys():
- scripts[ext].append(name)
- else:
- cmd.append(fname)
- for directory in ('bin', 'scripts'):
- scan(gisbase, directory)
- # scan gui/scripts/
- gui_path = os.path.join(gisbase, 'etc', 'gui', 'scripts')
- if os.path.exists(gui_path):
- os.environ["PATH"] = os.getenv("PATH") + os.pathsep + gui_path
- cmd = cmd + os.listdir(gui_path)
- return set(cmd), scripts
- # replacement for which function from shutil (not available in all versions)
- # from http://hg.python.org/cpython/file/6860263c05b3/Lib/shutil.py#l1068
- # added because of Python scripts running Python scripts on MS Windows
- # see also ticket #2008 which is unrelated but same function was proposed
- def shutil_which(cmd, mode=os.F_OK | os.X_OK, path=None):
- """Given a command, mode, and a PATH string, return the path which
- conforms to the given mode on the PATH, or None if there is no such
- file.
- `mode` defaults to os.F_OK | os.X_OK. `path` defaults to the result
- of os.environ.get("PATH"), or can be overridden with a custom search
- path.
- :param cmd: the command
- :param mode:
- :param path:
- """
- # Check that a given file can be accessed with the correct mode.
- # Additionally check that `file` is not a directory, as on Windows
- # directories pass the os.access check.
- def _access_check(fn, mode):
- return (os.path.exists(fn) and os.access(fn, mode)
- and not os.path.isdir(fn))
- # If we're given a path with a directory part, look it up directly rather
- # than referring to PATH directories. This includes checking relative to the
- # current directory, e.g. ./script
- if os.path.dirname(cmd):
- if _access_check(cmd, mode):
- return cmd
- return None
- if path is None:
- path = os.environ.get("PATH", os.defpath)
- if not path:
- return None
- path = path.split(os.pathsep)
- if sys.platform == "win32":
- # The current directory takes precedence on Windows.
- if not os.curdir in path:
- path.insert(0, os.curdir)
- # PATHEXT is necessary to check on Windows.
- pathext = os.environ.get("PATHEXT", "").split(os.pathsep)
- map(lambda x: x.lower(), pathext) # force lowercase
- if '.py' not in pathext: # we assume that PATHEXT contains always '.py'
- pathext.insert(0, '.py')
- # See if the given file matches any of the expected path extensions.
- # This will allow us to short circuit when given "python.exe".
- # If it does match, only test that one, otherwise we have to try
- # others.
- if any(cmd.lower().endswith(ext.lower()) for ext in pathext):
- files = [cmd]
- else:
- files = [cmd + ext for ext in pathext]
- else:
- # On other platforms you don't have things like PATHEXT to tell you
- # what file suffixes are executable, so just pass on cmd as-is.
- files = [cmd]
- seen = set()
- for dir in path:
- normdir = os.path.normcase(dir)
- if not normdir in seen:
- seen.add(normdir)
- for thefile in files:
- name = os.path.join(dir, thefile)
- if _access_check(name, mode):
- return name
- return None
- # Added because of scripts calling scripts on MS Windows.
- # Module name (here cmd) differs from the file name (does not have extension).
- # Additionally, we don't run scripts using system executable mechanism,
- # so we need the full path name.
- # However, scripts are on the PATH and '.PY' in in PATHEXT, so we can use
- # shutil.which to get the full file path. Addons are on PATH too.
- # An alternative to which function call would be to check the script path and
- # addons path. This is proposed improvement for the future.
- # Another alternative is to check some global list of scripts but this list
- # needs to be created first. The question is what is less expensive.
- # Note that getting the full path is only part of the solution,
- # the other part is to use the right Python as an executable and pass the full
- # script path as a parameter.
- # Nevertheless, it is unclear on which places which extensions are added.
- # This function also could skip the check for platform but depends
- # how will be used, this is most general but not most effective.
- def get_real_command(cmd):
- """Returns the real file command for a module (cmd)
- For Python scripts on MS Windows it returns full path to the script
- and adds a '.py' extension.
- For other cases it just returns a module (name).
- So, you can just use this function for all without further check.
- >>> get_real_command('g.region')
- 'g.region'
- :param cmd: the command
- """
- if sys.platform == 'win32':
- # we in fact expect pure module name (without extension)
- # so, lets remove extension
- if os.path.splitext(cmd)[1] == '.py':
- cmd = cmd[:-3]
- full_path = shutil_which(cmd + '.py')
- if full_path:
- return full_path
- return cmd
- def make_command(prog, flags=b"", overwrite=False, quiet=False, verbose=False,
- errors=None, **options):
- """Return a list of strings suitable for use as the args parameter to
- Popen() or call(). Example:
- >>> make_command("g.message", flags = 'w', message = 'this is a warning')
- ['g.message', '-w', 'message=this is a warning']
- :param str prog: GRASS module
- :param str flags: flags to be used (given as a string)
- :param bool overwrite: True to enable overwriting the output (<tt>--o</tt>)
- :param bool quiet: True to run quietly (<tt>--q</tt>)
- :param bool verbose: True to run verbosely (<tt>--v</tt>)
- :param options: module's parameters
- :return: list of arguments
- """
- args = [_make_val(prog)]
- if overwrite:
- args.append(b"--o")
- if quiet:
- args.append(b"--q")
- if verbose:
- args.append(b"--v")
- if flags:
- flags = _make_val(flags)
- if b'-' in flags:
- raise ScriptError("'-' is not a valid flag")
- args.append(b"-" + bytes(flags))
- for opt, val in options.items():
- if opt in _popen_args:
- continue
- # convert string to bytes
- opt = encode(opt)
- if val != None:
- if opt.startswith(b'_'):
- opt = opt[1:]
- warning(_("To run the module <%s> add underscore at the end"
- " of the option <%s> to avoid conflict with Python"
- " keywords. Underscore at the beginning is"
- " depreciated in GRASS GIS 7.0 and will be removed"
- " in version 7.1.") % (prog, opt))
- elif opt.endswith(b'_'):
- opt = opt[:-1]
- args.append(opt + b'=' + _make_val(val))
- return args
- def handle_errors(returncode, result, args, kwargs):
- if returncode == 0:
- return result
- handler = kwargs.get('errors', 'raise')
- if handler.lower() == 'ignore':
- return result
- elif handler.lower() == 'status':
- return returncode
- elif handler.lower() == 'exit':
- sys.exit(1)
- else:
- # TODO: construction of the whole command is far from perfect
- args = make_command(*args, **kwargs)
- raise CalledModuleError(module=None, code=repr(args),
- returncode=returncode)
- def start_command(prog, flags=b"", overwrite=False, quiet=False,
- verbose=False, **kwargs):
- """Returns a Popen object with the command created by make_command.
- Accepts any of the arguments which Popen() accepts apart from "args"
- and "shell".
- >>> p = start_command("g.gisenv", stdout=subprocess.PIPE)
- >>> print(p) # doctest: +ELLIPSIS
- <...Popen object at 0x...>
- >>> print(p.communicate()[0]) # doctest: +SKIP
- GISDBASE='/opt/grass-data';
- LOCATION_NAME='spearfish60';
- MAPSET='glynn';
- GUI='text';
- MONITOR='x0';
- If the module parameter is the same as Python keyword, add
- underscore at the end of the parameter. For example, use
- ``lambda_=1.6`` instead of ``lambda=1.6``.
- :param str prog: GRASS module
- :param str flags: flags to be used (given as a string)
- :param bool overwrite: True to enable overwriting the output (<tt>--o</tt>)
- :param bool quiet: True to run quietly (<tt>--q</tt>)
- :param bool verbose: True to run verbosely (<tt>--v</tt>)
- :param kwargs: module's parameters
- :return: Popen object
- """
- options = {}
- popts = {}
- for opt, val in kwargs.items():
- if opt in _popen_args:
- popts[opt] = val
- else:
- if isinstance(val, unicode):
- val = encode(val)
- options[opt] = val
- args = make_command(prog, flags, overwrite, quiet, verbose, **options)
- if debug_level() > 0:
- sys.stderr.write("D1/%d: %s.start_command(): %s\n" % (debug_level(),
- __name__,
- ' '.join(args)))
- sys.stderr.flush()
- return Popen(args, **popts)
- def run_command(*args, **kwargs):
- """Execute a module synchronously
- This function passes all arguments to ``start_command()``,
- then waits for the process to complete. It is similar to
- ``subprocess.check_call()``, but with the ``make_command()``
- interface.
- For backward compatibility, the function returns exit code
- by default but only if it is equal to zero. An exception is raised
- in case of an non-zero return code.
- >>> run_command('g.region', raster='elevation')
- 0
- See :func:`start_command()` for details about parameters and usage.
- ..note::
- You should ignore the return value of this function unless, you
- change the default behavior using *errors* parameter.
- :param *args: unnamed arguments passed to ``start_command()``
- :param **kwargs: named arguments passed to ``start_command()``
- :returns: 0 with default parameters for backward compatibility only
- :raises: ``CalledModuleError`` when module returns non-zero return code
- """
- if _capture_stderr and 'stderr' not in kwargs.keys():
- kwargs['stderr'] = PIPE
- ps = start_command(*args, **kwargs)
- if _capture_stderr:
- stdout, stderr = ps.communicate()
- returncode = ps.poll()
- if returncode:
- sys.stderr.write(stderr)
- else:
- returncode = ps.wait()
- return handle_errors(returncode, returncode, args, kwargs)
- def pipe_command(*args, **kwargs):
- """Passes all arguments to start_command(), but also adds
- "stdout = PIPE". Returns the Popen object.
- >>> p = pipe_command("g.gisenv")
- >>> print(p) # doctest: +ELLIPSIS
- <....Popen object at 0x...>
- >>> print(p.communicate()[0]) # doctest: +SKIP
- GISDBASE='/opt/grass-data';
- LOCATION_NAME='spearfish60';
- MAPSET='glynn';
- GUI='text';
- MONITOR='x0';
- :param list args: list of unnamed arguments (see start_command() for details)
- :param list kwargs: list of named arguments (see start_command() for details)
- :return: Popen object
- """
- kwargs['stdout'] = PIPE
- return start_command(*args, **kwargs)
- def feed_command(*args, **kwargs):
- """Passes all arguments to start_command(), but also adds
- "stdin = PIPE". Returns the Popen object.
- :param list args: list of unnamed arguments (see start_command() for details)
- :param list kwargs: list of named arguments (see start_command() for details)
- :return: Popen object
- """
- kwargs['stdin'] = PIPE
- return start_command(*args, **kwargs)
- def read_command(*args, **kwargs):
- """Passes all arguments to pipe_command, then waits for the process to
- complete, returning its stdout (i.e. similar to shell `backticks`).
- :param list args: list of unnamed arguments (see start_command() for details)
- :param list kwargs: list of named arguments (see start_command() for details)
- :return: stdout
- """
- if _capture_stderr and 'stderr' not in kwargs.keys():
- kwargs['stderr'] = PIPE
- process = pipe_command(*args, **kwargs)
- stdout, stderr = process.communicate()
- returncode = process.poll()
- if _capture_stderr and returncode:
- sys.stderr.write(stderr)
- return handle_errors(returncode, stdout, args, kwargs)
- def parse_command(*args, **kwargs):
- """Passes all arguments to read_command, then parses the output
- by parse_key_val().
- Parsing function can be optionally given by <em>parse</em> parameter
- including its arguments, e.g.
- ::
- parse_command(..., parse = (grass.parse_key_val, { 'sep' : ':' }))
- or you can simply define <em>delimiter</em>
- ::
- parse_command(..., delimiter = ':')
- :param args: list of unnamed arguments (see start_command() for details)
- :param kwargs: list of named arguments (see start_command() for details)
- :return: parsed module output
- """
- parse = None
- parse_args = {}
- if 'parse' in kwargs:
- if isinstance(kwargs['parse'], tuple):
- parse = kwargs['parse'][0]
- parse_args = kwargs['parse'][1]
- del kwargs['parse']
- if 'delimiter' in kwargs:
- parse_args = {'sep': kwargs['delimiter']}
- del kwargs['delimiter']
- if not parse:
- parse = parse_key_val # use default fn
- res = read_command(*args, **kwargs)
- return parse(res, **parse_args)
- def write_command(*args, **kwargs):
- """Execute a module with standard input given by *stdin* parameter.
- Passes all arguments to ``feed_command()``, with the string specified
- by the *stdin* argument fed to the process' standard input.
- >>> gscript.write_command(
- ... 'v.in.ascii', input='-',
- ... stdin='%s|%s' % (635818.8, 221342.4),
- ... output='view_point')
- 0
- See ``start_command()`` for details about parameters and usage.
- :param *args: unnamed arguments passed to ``start_command()``
- :param **kwargs: named arguments passed to ``start_command()``
- :returns: 0 with default parameters for backward compatibility only
- :raises: ``CalledModuleError`` when module returns non-zero return code
- """
- # TODO: should we delete it from kwargs?
- stdin = kwargs['stdin']
- if _capture_stderr and 'stderr' not in kwargs.keys():
- kwargs['stderr'] = PIPE
- process = feed_command(*args, **kwargs)
- unused, stderr = process.communicate(stdin)
- returncode = process.poll()
- if _capture_stderr and returncode:
- sys.stderr.write(stderr)
- return handle_errors(returncode, returncode, args, kwargs)
- def exec_command(prog, flags="", overwrite=False, quiet=False, verbose=False,
- env=None, **kwargs):
- """Interface to os.execvpe(), but with the make_command() interface.
- :param str prog: GRASS module
- :param str flags: flags to be used (given as a string)
- :param bool overwrite: True to enable overwriting the output (<tt>--o</tt>)
- :param bool quiet: True to run quietly (<tt>--q</tt>)
- :param bool verbose: True to run verbosely (<tt>--v</tt>)
- :param env: directory with environmental variables
- :param list kwargs: module's parameters
- """
- args = make_command(prog, flags, overwrite, quiet, verbose, **kwargs)
- if env is None:
- env = os.environ
- os.execvpe(prog, args, env)
- # interface to g.message
- def message(msg, flag=None):
- """Display a message using `g.message`
- :param str msg: message to be displayed
- :param str flag: flags (given as string)
- """
- run_command("g.message", flags=flag, message=msg, errors='ignore')
- def debug(msg, debug=1):
- """Display a debugging message using `g.message -d`
- :param str msg: debugging message to be displayed
- :param str debug: debug level (0-5)
- """
- if debug_level() >= debug:
- # TODO: quite a random hack here, do we need it somewhere else too?
- if sys.platform == "win32":
- msg = msg.replace('&', '^&')
- run_command("g.message", flags='d', message=msg, debug=debug)
- def verbose(msg):
- """Display a verbose message using `g.message -v`
- :param str msg: verbose message to be displayed
- """
- message(msg, flag='v')
- def info(msg):
- """Display an informational message using `g.message -i`
- :param str msg: informational message to be displayed
- """
- message(msg, flag='i')
- def percent(i, n, s):
- """Display a progress info message using `g.message -p`
- ::
- message(_("Percent complete..."))
- n = 100
- for i in range(n):
- percent(i, n, 1)
- percent(1, 1, 1)
- :param int i: current item
- :param int n: total number of items
- :param int s: increment size
- """
- message("%d %d %d" % (i, n, s), flag='p')
- def warning(msg):
- """Display a warning message using `g.message -w`
- :param str msg: warning message to be displayed
- """
- message(msg, flag='w')
- def error(msg):
- """Display an error message using `g.message -e`
- This function does not end the execution of the program.
- The right action after the error is up to the caller.
- For error handling using the standard mechanism use :func:`fatal()`.
- :param str msg: error message to be displayed
- """
- message(msg, flag='e')
- def fatal(msg):
- """Display an error message using `g.message -e`, then abort or raise
- Raises exception when module global raise_on_error is 'True', abort
- (calls exit) otherwise.
- Use :func:`set_raise_on_error()` to set the behavior.
- :param str msg: error message to be displayed
- """
- global raise_on_error
- if raise_on_error:
- raise ScriptError(msg)
- error(msg)
- sys.exit(1)
- def set_raise_on_error(raise_exp=True):
- """Define behaviour on fatal error (fatal() called)
- :param bool raise_exp: True to raise ScriptError instead of calling
- sys.exit(1) in fatal()
- :return: current status
- """
- global raise_on_error
- tmp_raise = raise_on_error
- raise_on_error = raise_exp
- return tmp_raise
- def get_raise_on_error():
- """Return True if a ScriptError exception is raised instead of calling
- sys.exit(1) in case a fatal error was invoked with fatal()
- """
- global raise_on_error
- return raise_on_error
- # TODO: solve also warnings (not printed now)
- def set_capture_stderr(capture=True):
- """Enable capturing standard error output of modules and print it.
- By default, standard error output (stderr) of child processes shows
- in the same place as output of the parent process. This may not
- always be the same place as ``sys.stderr`` is written.
- After calling this function, functions in the ``grass.script``
- package will capture the stderr of child processes and pass it
- to ``sys.stderr`` if there is an error.
- .. note::
- This is advantages for interactive shells such as the one in GUI
- and interactive notebooks such as Jupyer Notebook.
- The capturing can be applied only in certain cases, for example
- in case of run_command() it is applied because run_command() nor
- its callers do not handle the streams, however feed_command()
- cannot do capturing because its callers handle the streams.
- The previous state is returned. Passing ``False`` disables the
- capturing.
- .. versionadded:: 7.4
- """
- global _capture_stderr
- tmp = _capture_stderr
- _capture_stderr = capture
- return tmp
- def get_capture_stderr():
- """Return True if stderr is captured, False otherwise.
- See set_capture_stderr().
- """
- global _capture_stderr
- return _capture_stderr
- # interface to g.parser
- def _parse_opts(lines):
- options = {}
- flags = {}
- for line in lines:
- if not line:
- break
- try:
- [var, val] = line.split(b'=', 1)
- except:
- raise SyntaxError("invalid output from g.parser: %s" % line)
- if var.startswith(b'flag_'):
- flags[var[5:]] = bool(int(val))
- elif var.startswith(b'opt_'):
- options[var[4:]] = val
- elif var in [b'GRASS_OVERWRITE', b'GRASS_VERBOSE']:
- os.environ[var] = val
- else:
- raise SyntaxError("invalid output from g.parser: %s" % line)
- return (options, flags)
- def parser():
- """Interface to g.parser, intended to be run from the top-level, e.g.:
- ::
- if __name__ == "__main__":
- options, flags = grass.parser()
- main()
- Thereafter, the global variables "options" and "flags" will be
- dictionaries containing option/flag values, keyed by lower-case
- option/flag names. The values in "options" are strings, those in
- "flags" are Python booleans.
- Overview table of parser standard options:
- https://grass.osgeo.org/grass73/manuals/parser_standard_options.html
- """
- if not os.getenv("GISBASE"):
- print("You must be in GRASS GIS to run this program.", file=sys.stderr)
- sys.exit(1)
- cmdline = [basename(encode(sys.argv[0]))]
- cmdline += [b'"' + encode(arg) + b'"' for arg in sys.argv[1:]]
- environ[b'CMDLINE'] = b' '.join(cmdline)
- argv = sys.argv[:]
- name = argv[0]
- if not os.path.isabs(name):
- if os.sep in name or (os.altsep and os.altsep in name):
- argv[0] = os.path.abspath(name)
- else:
- argv[0] = os.path.join(sys.path[0], name)
- prog = "g.parser.exe" if sys.platform == "win32" else "g.parser"
- p = subprocess.Popen([prog, '-n'] + argv, stdout=subprocess.PIPE)
- s = p.communicate()[0]
- lines = s.split(b'\0')
- if not lines or lines[0] != b"@ARGS_PARSED@":
- stdout = os.fdopen(sys.stdout.fileno(), 'wb')
- stdout.write(s)
- sys.exit(p.returncode)
- return _parse_opts(lines[1:])
- # interface to g.tempfile
- def tempfile(create=True):
- """Returns the name of a temporary file, created with g.tempfile.
- :param bool create: True to create a file
- :return: path to a tmp file
- """
- flags = ''
- if not create:
- flags += 'd'
- return read_command("g.tempfile", flags=flags, pid=os.getpid()).strip()
- def tempdir():
- """Returns the name of a temporary dir, created with g.tempfile."""
- tmp = tempfile(create=False)
- os.mkdir(tmp)
- return tmp
- def _compare_projection(dic):
- """Check if projection has some possibility of duplicate names like
- Universal Transverse Mercator and Universe Transverse Mercator and
- unify them
- :param dic: The dictionary containing information about projection
- :return: The dictionary with the new values if needed
- """
- # the lookup variable is a list of list, each list contains all the
- # possible name for a projection system
- lookup = [['Universal Transverse Mercator', 'Universe Transverse Mercator']]
- for lo in lookup:
- for n in range(len(dic['name'])):
- if dic['name'][n] in lo:
- dic['name'][n] = lo[0]
- return dic
- def _compare_units(dic):
- """Check if units has some possibility of duplicate names like
- meter and metre and unify them
- :param dic: The dictionary containing information about units
- :return: The dictionary with the new values if needed
- """
- # the lookup variable is a list of list, each list contains all the
- # possible name for a units
- lookup = [['meter', 'metre'], ['meters', 'metres'], ['kilometer',
- 'kilometre'], ['kilometers', 'kilometres']]
- for l in lookup:
- for n in range(len(dic['unit'])):
- if dic['unit'][n].lower() in l:
- dic['unit'][n] = l[0]
- for n in range(len(dic['units'])):
- if dic['units'][n].lower() in l:
- dic['units'][n] = l[0]
- return dic
- def _text_to_key_value_dict(filename, sep=":", val_sep=",", checkproj=False,
- checkunits=False):
- """Convert a key-value text file, where entries are separated by newlines
- and the key and value are separated by `sep', into a key-value dictionary
- and discover/use the correct data types (float, int or string) for values.
- :param str filename: The name or name and path of the text file to convert
- :param str sep: The character that separates the keys and values, default
- is ":"
- :param str val_sep: The character that separates the values of a single
- key, default is ","
- :param bool checkproj: True if it has to check some information about
- projection system
- :param bool checkproj: True if it has to check some information about units
- :return: The dictionary
- A text file with this content:
- ::
- a: Hello
- b: 1.0
- c: 1,2,3,4,5
- d : hello,8,0.1
- Will be represented as this dictionary:
- ::
- {'a': ['Hello'], 'c': [1, 2, 3, 4, 5], 'b': [1.0], 'd': ['hello', 8, 0.1]}
- """
- text = open(filename, "r").readlines()
- kvdict = KeyValue()
- for line in text:
- if line.find(sep) >= 0:
- key, value = line.split(sep)
- key = key.strip()
- value = value.strip()
- else:
- # Jump over empty values
- continue
- values = value.split(val_sep)
- value_list = []
- for value in values:
- not_float = False
- not_int = False
- # Convert values into correct types
- # We first try integer then float
- try:
- value_converted = int(value)
- except:
- not_int = True
- if not_int:
- try:
- value_converted = float(value)
- except:
- not_float = True
- if not_int and not_float:
- value_converted = value.strip()
- value_list.append(value_converted)
- kvdict[key] = value_list
- if checkproj:
- kvdict = _compare_projection(kvdict)
- if checkunits:
- kvdict = _compare_units(kvdict)
- return kvdict
- def compare_key_value_text_files(filename_a, filename_b, sep=":",
- val_sep=",", precision=0.000001,
- proj=False, units=False):
- """Compare two key-value text files
- This method will print a warning in case keys that are present in the first
- file are not present in the second one.
- The comparison method tries to convert the values into their native format
- (float, int or string) to allow correct comparison.
- An example key-value text file may have this content:
- ::
- a: Hello
- b: 1.0
- c: 1,2,3,4,5
- d : hello,8,0.1
- :param str filename_a: name of the first key-value text file
- :param str filenmae_b: name of the second key-value text file
- :param str sep: character that separates the keys and values, default is ":"
- :param str val_sep: character that separates the values of a single key, default is ","
- :param double precision: precision with which the floating point values are compared
- :param bool proj: True if it has to check some information about projection system
- :param bool units: True if it has to check some information about units
- :return: True if full or almost identical, False if different
- """
- dict_a = _text_to_key_value_dict(filename_a, sep, checkproj=proj,
- checkunits=units)
- dict_b = _text_to_key_value_dict(filename_b, sep, checkproj=proj,
- checkunits=units)
- if sorted(dict_a.keys()) != sorted(dict_b.keys()):
- return False
- # We compare matching keys
- for key in dict_a.keys():
- # Floating point values must be handled separately
- if isinstance(dict_a[key], float) and isinstance(dict_b[key], float):
- if abs(dict_a[key] - dict_b[key]) > precision:
- return False
- elif isinstance(dict_a[key], float) or isinstance(dict_b[key], float):
- warning(_("Mixing value types. Will try to compare after "
- "integer conversion"))
- return int(dict_a[key]) == int(dict_b[key])
- elif key == "+towgs84":
- # We compare the sum of the entries
- if abs(sum(dict_a[key]) - sum(dict_b[key])) > precision:
- return False
- else:
- if dict_a[key] != dict_b[key]:
- return False
- return True
- # interface to g.gisenv
- def gisenv():
- """Returns the output from running g.gisenv (with no arguments), as a
- dictionary. Example:
- >>> env = gisenv()
- >>> print(env['GISDBASE']) # doctest: +SKIP
- /opt/grass-data
- :return: list of GRASS variables
- """
- s = read_command("g.gisenv", flags='n')
- return parse_key_val(s)
- # interface to g.region
- def locn_is_latlong():
- """Tests if location is lat/long. Value is obtained
- by checking the "g.region -pu" projection code.
- :return: True for a lat/long region, False otherwise
- """
- s = read_command("g.region", flags='pu')
- kv = parse_key_val(s, ':')
- if kv['projection'].split(' ')[0] == '3':
- return True
- else:
- return False
- def region(region3d=False, complete=False):
- """Returns the output from running "g.region -gu", as a
- dictionary. Example:
- :param bool region3d: True to get 3D region
- :param bool complete:
- >>> curent_region = region()
- >>> # obtain n, s, e and w values
- >>> [curent_region[key] for key in "nsew"] # doctest: +ELLIPSIS
- [..., ..., ..., ...]
- >>> # obtain ns and ew resulutions
- >>> (curent_region['nsres'], curent_region['ewres']) # doctest: +ELLIPSIS
- (..., ...)
- :return: dictionary of region values
- """
- flgs = 'gu'
- if region3d:
- flgs += '3'
- if complete:
- flgs += 'cep'
- s = read_command("g.region", flags=flgs)
- reg = parse_key_val(s, val_type=float)
- for k in ['projection', 'zone', 'rows', 'cols', 'cells',
- 'rows3', 'cols3', 'cells3', 'depths']:
- if k not in reg:
- continue
- reg[k] = int(reg[k])
- return reg
- def region_env(region3d=False, **kwargs):
- """Returns region settings as a string which can used as
- GRASS_REGION environmental variable.
- If no 'kwargs' are given then the current region is used. Note
- that this function doesn't modify the current region!
- See also :func:`use_temp_region()` for alternative method how to define
- temporary region used for raster-based computation.
- :param bool region3d: True to get 3D region
- :param kwargs: g.region's parameters like 'raster', 'vector' or 'region'
- ::
- os.environ['GRASS_REGION'] = grass.region_env(region='detail')
- grass.mapcalc('map=1', overwrite=True)
- os.environ.pop('GRASS_REGION')
- :return: string with region values
- :return: empty string on error
- """
- # read proj/zone from WIND file
- env = gisenv()
- windfile = os.path.join(env['GISDBASE'], env['LOCATION_NAME'],
- env['MAPSET'], "WIND")
- fd = open(windfile, "r")
- grass_region = ''
- for line in fd.readlines():
- key, value = map(lambda x: x.strip(), line.split(":", 1))
- if kwargs and key not in ('proj', 'zone'):
- continue
- if not kwargs and not region3d and \
- key in ('top', 'bottom', 'cols3', 'rows3',
- 'depths', 'e-w resol3', 'n-s resol3', 't-b resol'):
- continue
- grass_region += '%s: %s;' % (key, value)
- if not kwargs: # return current region
- return grass_region
- # read other values from `g.region -gu`
- flgs = 'ug'
- if region3d:
- flgs += '3'
- s = read_command('g.region', flags=flgs, **kwargs)
- if not s:
- return ''
- reg = parse_key_val(s)
- kwdata = [('north', 'n'),
- ('south', 's'),
- ('east', 'e'),
- ('west', 'w'),
- ('cols', 'cols'),
- ('rows', 'rows'),
- ('e-w resol', 'ewres'),
- ('n-s resol', 'nsres')]
- if region3d:
- kwdata += [('top', 't'),
- ('bottom', 'b'),
- ('cols3', 'cols3'),
- ('rows3', 'rows3'),
- ('depths', 'depths'),
- ('e-w resol3', 'ewres3'),
- ('n-s resol3', 'nsres3'),
- ('t-b resol', 'tbres')]
- for wkey, rkey in kwdata:
- grass_region += '%s: %s;' % (wkey, reg[rkey])
- return grass_region
- def use_temp_region():
- """Copies the current region to a temporary region with "g.region save=",
- then sets WIND_OVERRIDE to refer to that region. Installs an atexit
- handler to delete the temporary region upon termination.
- """
- name = "tmp.%s.%d" % (os.path.basename(sys.argv[0]), os.getpid())
- run_command("g.region", save=name, overwrite=True)
- os.environ['WIND_OVERRIDE'] = name
- atexit.register(del_temp_region)
- def del_temp_region():
- """Unsets WIND_OVERRIDE and removes any region named by it."""
- try:
- name = os.environ.pop('WIND_OVERRIDE')
- run_command("g.remove", flags='f', quiet=True, type='region', name=name)
- except:
- pass
- # interface to g.findfile
- def find_file(name, element='cell', mapset=None):
- """Returns the output from running g.findfile as a
- dictionary. Example:
- >>> result = find_file('elevation', element='cell')
- >>> print(result['fullname'])
- elevation@PERMANENT
- >>> print(result['file']) # doctest: +ELLIPSIS
- /.../PERMANENT/cell/elevation
- :param str name: file name
- :param str element: element type (default 'cell')
- :param str mapset: mapset name (default all mapsets in search path)
- :return: parsed output of g.findfile
- """
- if element == 'raster' or element == 'rast':
- verbose(_('Element type should be "cell" and not "%s"') % element)
- element = 'cell'
- # g.findfile returns non-zero when file was not found
- # se we ignore return code and just focus on stdout
- process = start_command('g.findfile', flags='n',
- element=element, file=name, mapset=mapset,
- stdout=PIPE)
- stdout = process.communicate()[0]
- return parse_key_val(stdout)
- # interface to g.list
- def list_strings(type, pattern=None, mapset=None, exclude=None, flag=''):
- """List of elements as strings.
- Returns the output from running g.list, as a list of qualified
- names.
- :param str type: element type (raster, vector, raster_3d, region, ...)
- :param str pattern: pattern string
- :param str mapset: mapset name (if not given use search path)
- :param str exclude: pattern string to exclude maps from the research
- :param str flag: pattern type: 'r' (basic regexp), 'e' (extended regexp),
- or '' (glob pattern)
- :return: list of elements
- """
- if type == 'cell':
- verbose(_('Element type should be "raster" and not "%s"') % type)
- result = list()
- for line in read_command("g.list",
- quiet=True,
- flags='m' + flag,
- type=type,
- pattern=pattern,
- exclude=exclude,
- mapset=mapset).splitlines():
- result.append(line.strip())
- return result
- def list_pairs(type, pattern=None, mapset=None, exclude=None, flag=''):
- """List of elements as pairs
- Returns the output from running g.list, as a list of
- (name, mapset) pairs
- :param str type: element type (raster, vector, raster_3d, region, ...)
- :param str pattern: pattern string
- :param str mapset: mapset name (if not given use search path)
- :param str exclude: pattern string to exclude maps from the research
- :param str flag: pattern type: 'r' (basic regexp), 'e' (extended regexp),
- or '' (glob pattern)
- :return: list of elements
- """
- return [tuple(map.split('@', 1)) for map in list_strings(type, pattern,
- mapset, exclude,
- flag)]
- def list_grouped(type, pattern=None, check_search_path=True, exclude=None,
- flag=''):
- """List of elements grouped by mapsets.
- Returns the output from running g.list, as a dictionary where the
- keys are mapset names and the values are lists of maps in that
- mapset. Example:
- >>> list_grouped('vect', pattern='*roads*')['PERMANENT']
- ['railroads', 'roadsmajor']
- :param str type: element type (raster, vector, raster_3d, region, ...) or list of elements
- :param str pattern: pattern string
- :param str check_search_path: True to add mapsets for the search path
- with no found elements
- :param str exclude: pattern string to exclude maps from the research
- :param str flag: pattern type: 'r' (basic regexp), 'e' (extended regexp),
- or '' (glob pattern)
- :return: directory of mapsets/elements
- """
- if isinstance(type, python_types.StringTypes) or len(type) == 1:
- types = [type]
- store_types = False
- else:
- types = type
- store_types = True
- flag += 't'
- for i in range(len(types)):
- if types[i] == 'cell':
- verbose(_('Element type should be "raster" and not "%s"') % types[i])
- types[i] = 'raster'
- result = {}
- if check_search_path:
- for mapset in mapsets(search_path=True):
- if store_types:
- result[mapset] = {}
- else:
- result[mapset] = []
- mapset = None
- for line in read_command("g.list", quiet=True, flags="m" + flag,
- type=types, pattern=pattern, exclude=exclude).splitlines():
- try:
- name, mapset = line.split('@')
- except ValueError:
- warning(_("Invalid element '%s'") % line)
- continue
- if store_types:
- type_, name = name.split('/')
- if mapset in result:
- if type_ in result[mapset]:
- result[mapset][type_].append(name)
- else:
- result[mapset][type_] = [name, ]
- else:
- result[mapset] = {type_: [name, ]}
- else:
- if mapset in result:
- result[mapset].append(name)
- else:
- result[mapset] = [name, ]
- return result
- # color parsing
- named_colors = {
- "white": (1.00, 1.00, 1.00),
- "black": (0.00, 0.00, 0.00),
- "red": (1.00, 0.00, 0.00),
- "green": (0.00, 1.00, 0.00),
- "blue": (0.00, 0.00, 1.00),
- "yellow": (1.00, 1.00, 0.00),
- "magenta": (1.00, 0.00, 1.00),
- "cyan": (0.00, 1.00, 1.00),
- "aqua": (0.00, 0.75, 0.75),
- "grey": (0.75, 0.75, 0.75),
- "gray": (0.75, 0.75, 0.75),
- "orange": (1.00, 0.50, 0.00),
- "brown": (0.75, 0.50, 0.25),
- "purple": (0.50, 0.00, 1.00),
- "violet": (0.50, 0.00, 1.00),
- "indigo": (0.00, 0.50, 1.00)}
- def parse_color(val, dflt=None):
- """Parses the string "val" as a GRASS colour, which can be either one of
- the named colours or an R:G:B tuple e.g. 255:255:255. Returns an
- (r,g,b) triple whose components are floating point values between 0
- and 1. Example:
- >>> parse_color("red")
- (1.0, 0.0, 0.0)
- >>> parse_color("255:0:0")
- (1.0, 0.0, 0.0)
- :param val: color value
- :param dflt: default color value
- :return: tuple RGB
- """
- if val in named_colors:
- return named_colors[val]
- vals = val.split(':')
- if len(vals) == 3:
- return tuple(float(v) / 255 for v in vals)
- return dflt
- # check GRASS_OVERWRITE
- def overwrite():
- """Return True if existing files may be overwritten"""
- owstr = 'GRASS_OVERWRITE'
- return owstr in os.environ and os.environ[owstr] != '0'
- # check GRASS_VERBOSE
- def verbosity():
- """Return the verbosity level selected by GRASS_VERBOSE"""
- vbstr = os.getenv('GRASS_VERBOSE')
- if vbstr:
- return int(vbstr)
- else:
- return 2
- ## various utilities, not specific to GRASS
- def find_program(pgm, *args):
- """Attempt to run a program, with optional arguments.
- You must call the program in a way that will return a successful
- exit code. For GRASS modules this means you need to pass it some
- valid CLI option, like "--help". For other programs a common
- valid do-little option is usually "--version".
- Example:
- >>> find_program('r.sun', '--help')
- True
- >>> find_program('ls', '--version')
- True
- :param str pgm: program name
- :param args: list of arguments
- :return: False if the attempt failed due to a missing executable
- or non-zero return code
- :return: True otherwise
- """
- nuldev = open(os.devnull, 'w+')
- try:
- # TODO: the doc or impl is not correct, any return code is accepted
- call([pgm] + list(args), stdin = nuldev, stdout = nuldev, stderr = nuldev)
- found = True
- except:
- found = False
- nuldev.close()
- return found
- # interface to g.mapsets
- def mapsets(search_path=False):
- """List available mapsets
- :param bool search_path: True to list mapsets only in search path
- :return: list of mapsets
- """
- if search_path:
- flags = 'p'
- else:
- flags = 'l'
- mapsets = read_command('g.mapsets',
- flags=flags,
- sep='newline',
- quiet=True)
- if not mapsets:
- fatal(_("Unable to list mapsets"))
- return mapsets.splitlines()
- # interface to `g.proj -c`
- def create_location(dbase, location, epsg=None, proj4=None, filename=None,
- wkt=None, datum=None, datum_trans=None, desc=None,
- overwrite=False):
- """Create new location
- Raise ScriptError on error.
- :param str dbase: path to GRASS database
- :param str location: location name to create
- :param epsg: if given create new location based on EPSG code
- :param proj4: if given create new location based on Proj4 definition
- :param str filename: if given create new location based on georeferenced file
- :param str wkt: if given create new location based on WKT definition
- (path to PRJ file)
- :param datum: GRASS format datum code
- :param datum_trans: datum transformation parameters (used for epsg and proj4)
- :param desc: description of the location (creates MYNAME file)
- :param bool overwrite: True to overwrite location if exists(WARNING:
- ALL DATA from existing location ARE DELETED!)
- """
- gisdbase = None
- if epsg or proj4 or filename or wkt:
- # FIXME: changing GISDBASE mid-session is not background-job safe
- gisdbase = gisenv()['GISDBASE']
- run_command('g.gisenv', set='GISDBASE=%s' % dbase)
- # create dbase if not exists
- if not os.path.exists(dbase):
- os.mkdir(dbase)
- # check if location already exists
- if os.path.exists(os.path.join(dbase, location)):
- if not overwrite:
- warning(_("Location <%s> already exists. Operation canceled.") % location)
- return
- else:
- warning(_("Location <%s> already exists and will be overwritten") % location)
- shutil.rmtree(os.path.join(dbase, location))
- kwargs = dict()
- if datum:
- kwargs['datum'] = datum
- if datum_trans:
- kwargs['datum_trans'] = datum_trans
- if epsg:
- ps = pipe_command('g.proj', quiet=True, flags='t', epsg=epsg,
- location=location, stderr=PIPE, **kwargs)
- elif proj4:
- ps = pipe_command('g.proj', quiet=True, flags='t', proj4=proj4,
- location=location, stderr=PIPE, **kwargs)
- elif filename:
- ps = pipe_command('g.proj', quiet=True, georef=filename,
- location=location, stderr=PIPE)
- elif wkt:
- ps = pipe_command('g.proj', quiet=True, wkt=wkt, location=location,
- stderr=PIPE)
- else:
- _create_location_xy(dbase, location)
- if epsg or proj4 or filename or wkt:
- error = ps.communicate()[1]
- run_command('g.gisenv', set='GISDBASE=%s' % gisdbase)
- if ps.returncode != 0 and error:
- raise ScriptError(repr(error))
- try:
- fd = codecs.open(os.path.join(dbase, location, 'PERMANENT', 'MYNAME'),
- encoding='utf-8', mode='w')
- if desc:
- fd.write(desc + os.linesep)
- else:
- fd.write(os.linesep)
- fd.close()
- except OSError as e:
- raise ScriptError(repr(e))
- def _create_location_xy(database, location):
- """Create unprojected location
- Raise ScriptError on error.
- :param database: GRASS database where to create new location
- :param location: location name
- """
- cur_dir = os.getcwd()
- try:
- os.chdir(database)
- os.mkdir(location)
- os.mkdir(os.path.join(location, 'PERMANENT'))
- # create DEFAULT_WIND and WIND files
- regioninfo = ['proj: 0',
- 'zone: 0',
- 'north: 1',
- 'south: 0',
- 'east: 1',
- 'west: 0',
- 'cols: 1',
- 'rows: 1',
- 'e-w resol: 1',
- 'n-s resol: 1',
- 'top: 1',
- 'bottom: 0',
- 'cols3: 1',
- 'rows3: 1',
- 'depths: 1',
- 'e-w resol3: 1',
- 'n-s resol3: 1',
- 't-b resol: 1']
- defwind = open(os.path.join(location,
- "PERMANENT", "DEFAULT_WIND"), 'w')
- for param in regioninfo:
- defwind.write(param + '%s' % os.linesep)
- defwind.close()
- shutil.copy(os.path.join(location, "PERMANENT", "DEFAULT_WIND"),
- os.path.join(location, "PERMANENT", "WIND"))
- os.chdir(cur_dir)
- except OSError as e:
- raise ScriptError(repr(e))
- # interface to g.version
- def version():
- """Get GRASS version as dictionary
- ::
- >>> print(version())
- {'proj4': '4.8.0', 'geos': '3.3.5', 'libgis_revision': '52468',
- 'libgis_date': '2012-07-27 22:53:30 +0200 (Fri, 27 Jul 2012)',
- 'version': '7.0.svn', 'date': '2012', 'gdal': '2.0dev',
- 'revision': '53670'}
- """
- data = parse_command('g.version', flags='rge', errors='ignore')
- for k, v in data.items():
- data[k.strip()] = v.replace('"', '').strip()
- return data
- # get debug_level
- _debug_level = None
- def debug_level(force=False):
- global _debug_level
- if not force and _debug_level is not None:
- return _debug_level
- _debug_level = 0
- if find_program('g.gisenv', '--help'):
- try:
- _debug_level = int(gisenv().get('DEBUG', 0))
- if _debug_level < 0 or _debug_level > 5:
- raise ValueError(_("Debug level {0}").format(_debug_level))
- except ValueError as e:
- _debug_level = 0
- sys.stderr.write(_("WARNING: Ignoring unsupported debug level (must be >=0 and <=5). {0}\n").format(e))
-
- return _debug_level
- def legal_name(s):
- """Checks if the string contains only allowed characters.
- This is the Python implementation of :func:`G_legal_filename()` function.
- ..note::
- It is not clear when exactly use this function, but it might be
- useful anyway for checking map names and column names.
- """
- if not s or s[0] == '.':
- warning(_("Illegal filename <%s>. Cannot be 'NULL' or start with " \
- "'.'.") % s)
- return False
- illegal = [c
- for c in s
- if c in '/"\'@,=*~' or c <= ' ' or c >= '\177']
- if illegal:
- illegal = ''.join(sorted(set(illegal)))
- warning(_("Illegal filename <%(s)s>. <%(il)s> not allowed.\n") % {
- 's': s, 'il': illegal})
- return False
- return True
- def create_environment(gisdbase, location, mapset):
- """Creates environment to be passed in run_command for example.
- Returns tuple with temporary file path and the environment. The user
- of this function is responsile for deleting the file."""
- tmp_gisrc_file = tempfile()
- with open(tmp_gisrc_file, 'w') as f:
- f.write('MAPSET: {mapset}\n'.format(mapset=mapset))
- f.write('GISDBASE: {g}\n'.format(g=gisdbase))
- f.write('LOCATION_NAME: {l}\n'.format(l=location))
- f.write('GUI: text\n')
- env = os.environ.copy()
- env['GISRC'] = tmp_gisrc_file
- return tmp_gisrc_file, env
- if __name__ == '__main__':
- import doctest
- doctest.testmod()
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