frame.py 22 KB

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  1. """!
  2. @package frame
  3. @brief Timeline Tool
  4. Classes:
  5. - frame::DataCursor
  6. - frame::TimelineFrame
  7. - frame::LookUp
  8. (C) 2012-2014 by the GRASS Development Team
  9. This program is free software under the GNU General Public License
  10. (>=v2). Read the file COPYING that comes with GRASS for details.
  11. @author Anna Kratochvilova <kratochanna gmail.com>
  12. """
  13. import os
  14. import signal
  15. from math import ceil
  16. from itertools import cycle
  17. import numpy as np
  18. import wx
  19. try:
  20. import matplotlib
  21. # The recommended way to use wx with mpl is with the WXAgg
  22. # backend.
  23. matplotlib.use('WXAgg')
  24. from matplotlib.figure import Figure
  25. from matplotlib.backends.backend_wxagg import \
  26. FigureCanvasWxAgg as FigCanvas, \
  27. NavigationToolbar2WxAgg as NavigationToolbar
  28. import matplotlib.dates as mdates
  29. from matplotlib import cbook
  30. except ImportError:
  31. raise ImportError(_('The Timeline Tool needs "Matplotlib" package to be installed.'))
  32. import grass.script as grass
  33. from core.utils import _
  34. import grass.temporal as tgis
  35. from core.gcmd import GError, GException, RunCommand
  36. from gui_core import gselect
  37. from core import globalvar
  38. ALPHA = 0.5
  39. COLORS = ['b', 'g', 'r', 'c', 'm', 'y', 'k']
  40. def check_version(*version):
  41. """!Checks if given version or newer is installed"""
  42. versionInstalled = []
  43. for i in matplotlib.__version__.split('.'):
  44. try:
  45. v = int(i)
  46. versionInstalled.append(v)
  47. except ValueError:
  48. versionInstalled.append(0)
  49. if versionInstalled < list(version):
  50. return False
  51. else:
  52. return True
  53. class TimelineFrame(wx.Frame):
  54. """!The main frame of the application"""
  55. def __init__(self, parent):
  56. wx.Frame.__init__(self, parent, id=wx.ID_ANY, title=_("GRASS GIS Timeline Tool"))
  57. tgis.init(True)
  58. self.datasets = []
  59. self.timeData = {}
  60. self._layout()
  61. self.temporalType = None
  62. self.unit = None
  63. # We create a database interface here to speedup the GUI
  64. self.dbif = tgis.SQLDatabaseInterfaceConnection()
  65. self.dbif.connect()
  66. def __del__(self):
  67. """!Close the database interface and stop the messenger and C-interface
  68. subprocesses.
  69. """
  70. if self.dbif.connected is True:
  71. self.dbif.close()
  72. tgis.stop_subprocesses()
  73. def _layout(self):
  74. """!Creates the main panel with all the controls on it:
  75. * mpl canvas
  76. * mpl navigation toolbar
  77. * Control panel for interaction
  78. """
  79. self.panel = wx.Panel(self)
  80. # Create the mpl Figure and FigCanvas objects.
  81. # 5x4 inches, 100 dots-per-inch
  82. #
  83. # color = wx.SystemSettings.GetColour(wx.SYS_COLOUR_BACKGROUND)
  84. self.fig = Figure((5.0, 4.0), facecolor=(1, 1, 1))
  85. self.canvas = FigCanvas(self.panel, wx.ID_ANY, self.fig)
  86. # axes are initialized later
  87. self.axes2d = None
  88. self.axes3d = None
  89. # Create the navigation toolbar, tied to the canvas
  90. #
  91. self.toolbar = NavigationToolbar(self.canvas)
  92. #
  93. # Layout
  94. #
  95. self.vbox = wx.BoxSizer(wx.VERTICAL)
  96. self.vbox.Add(self.canvas, 1, wx.LEFT | wx.TOP | wx.EXPAND)
  97. self.vbox.Add(self.toolbar, 0, wx.EXPAND)
  98. self.vbox.AddSpacer(10)
  99. gridSizer = wx.GridBagSizer(hgap=5, vgap=5)
  100. self.datasetSelect = gselect.Select(parent=self.panel, id=wx.ID_ANY,
  101. size=globalvar.DIALOG_GSELECT_SIZE,
  102. type='stds', multiple=True)
  103. self.drawButton = wx.Button(self.panel, id=wx.ID_ANY, label=_("Draw"))
  104. self.drawButton.Bind(wx.EVT_BUTTON, self.OnRedraw)
  105. self.helpButton = wx.Button(self.panel, id=wx.ID_ANY, label=_("Help"))
  106. self.helpButton.Bind(wx.EVT_BUTTON, self.OnHelp)
  107. self.view3dCheck = wx.CheckBox(self.panel, id=wx.ID_ANY,
  108. label=_("3D plot of spatio-temporal extents"))
  109. self.view3dCheck.Bind(wx.EVT_CHECKBOX, self.OnRedraw)
  110. if not check_version(1, 0, 0):
  111. self.view3dCheck.SetLabel(_("3D plot of spatio-temporal extents "
  112. "(matplotlib >= 1.0.0)"))
  113. self.view3dCheck.Disable()
  114. gridSizer.Add(wx.StaticText(self.panel, id=wx.ID_ANY,
  115. label=_("Select space time dataset(s):")),
  116. pos=(0, 0), flag=wx.EXPAND | wx.ALIGN_CENTER_VERTICAL)
  117. gridSizer.Add(self.datasetSelect, pos=(1, 0), flag=wx.EXPAND)
  118. gridSizer.Add(self.drawButton, pos=(1, 1), flag=wx.EXPAND)
  119. gridSizer.Add(self.helpButton, pos=(1, 2), flag=wx.EXPAND)
  120. gridSizer.Add(self.view3dCheck, pos=(2, 0), flag=wx.EXPAND | wx.ALIGN_CENTER_VERTICAL)
  121. self.vbox.Add(gridSizer, proportion=0, flag=wx.EXPAND | wx.ALL, border=10)
  122. self.panel.SetSizer(self.vbox)
  123. self.vbox.Fit(self)
  124. def _getData(self, timeseries):
  125. """!Load data and read properties"""
  126. self.timeData = {}
  127. mode = None
  128. unit = None
  129. for series in timeseries:
  130. name = series[0] + '@' + series[1]
  131. etype = series[2]
  132. sp = tgis.dataset_factory(etype, name)
  133. if not sp.is_in_db(dbif=self.dbif):
  134. GError(self, message=_("Dataset <%s> not found in temporal database") % (name))
  135. return
  136. sp.select(dbif=self.dbif)
  137. self.timeData[name] = {}
  138. self.timeData[name]['elementType'] = series[2]
  139. self.timeData[name]['temporalType'] = sp.get_temporal_type() # abs/rel
  140. if mode is None:
  141. mode = self.timeData[name]['temporalType']
  142. elif self.timeData[name]['temporalType'] != mode:
  143. GError(parent=self, message=_("Datasets have different temporal type "
  144. "(absolute x relative), which is not allowed."))
  145. return
  146. # check topology
  147. maps = sp.get_registered_maps_as_objects(dbif=self.dbif)
  148. self.timeData[name]['validTopology'] = sp.check_temporal_topology(maps=maps, dbif=self.dbif)
  149. self.timeData[name]['temporalMapType'] = sp.get_map_time() # point/interval
  150. self.timeData[name]['unit'] = None # only with relative
  151. if self.timeData[name]['temporalType'] == 'relative':
  152. start, end, self.timeData[name]['unit'] = sp.get_relative_time()
  153. if unit is None:
  154. unit = self.timeData[name]['unit']
  155. elif self.timeData[name]['unit'] != unit:
  156. GError(self, _("Datasets have different time unit which is not allowed."))
  157. return
  158. self.timeData[name]['start_datetime'] = []
  159. # self.timeData[name]['start_plot'] = []
  160. self.timeData[name]['end_datetime'] = []
  161. # self.timeData[name]['end_plot'] = []
  162. self.timeData[name]['names'] = []
  163. self.timeData[name]['north'] = []
  164. self.timeData[name]['south'] = []
  165. self.timeData[name]['west'] = []
  166. self.timeData[name]['east'] = []
  167. columns = ','.join(['name', 'start_time', 'end_time',
  168. 'north', 'south', 'west', 'east'])
  169. rows = sp.get_registered_maps(columns=columns, where=None,
  170. order='start_time', dbif=self.dbif)
  171. if rows is None:
  172. rows = []
  173. for row in rows:
  174. mapName, start, end, north, south, west, east = row
  175. self.timeData[name]['start_datetime'].append(start)
  176. self.timeData[name]['end_datetime'].append(end)
  177. self.timeData[name]['names'].append(mapName)
  178. self.timeData[name]['north'].append(north)
  179. self.timeData[name]['south'].append(south)
  180. self.timeData[name]['west'].append(west)
  181. self.timeData[name]['east'].append(east)
  182. self.temporalType = mode
  183. self.unit = unit
  184. def _draw3dFigure(self):
  185. """!Draws 3d view (spatio-temporal extents).
  186. Only for matplotlib versions >= 1.0.0.
  187. Earlier versions cannot draw time ticks and alpha
  188. and it has a slightly different API.
  189. """
  190. self.axes3d.clear()
  191. self.axes3d.grid(False)
  192. # self.axes3d.grid(True)
  193. if self.temporalType == 'absolute':
  194. if check_version(1, 1, 0):
  195. self.axes3d.zaxis_date()
  196. convert = mdates.date2num
  197. else:
  198. convert = lambda x: x
  199. colors = cycle(COLORS)
  200. plots = []
  201. for name in self.datasets:
  202. name = name[0] + '@' + name[1]
  203. startZ = convert(self.timeData[name]['start_datetime'])
  204. mapType = self.timeData[name]['temporalMapType']
  205. if mapType == 'interval':
  206. dZ = convert(self.timeData[name]['end_datetime']) - startZ
  207. else:
  208. dZ = [0] * len(startZ)
  209. startX = self.timeData[name]['west']
  210. dX = self.timeData[name]['east'] - np.array(startX)
  211. startY = self.timeData[name]['south']
  212. dY = self.timeData[name]['north'] - np.array(startY)
  213. color = colors.next()
  214. plots.append(self.axes3d.bar3d(startX, startY, startZ, dX, dY, dZ,
  215. color=color, alpha=ALPHA))
  216. params = grass.read_command('g.proj', flags='g')
  217. params = grass.parse_key_val(params)
  218. if 'unit' in params:
  219. self.axes3d.set_xlabel(_("X [%s]") % params['unit'])
  220. self.axes3d.set_ylabel(_("Y [%s]") % params['unit'])
  221. else:
  222. self.axes3d.set_xlabel(_("X"))
  223. self.axes3d.set_ylabel(_("Y"))
  224. self.axes3d.set_zlabel(_('Time'))
  225. self.axes3d.mouse_init()
  226. self.canvas.draw()
  227. def _draw2dFigure(self):
  228. """!Draws 2D plot (temporal extents)"""
  229. self.axes2d.clear()
  230. self.axes2d.grid(True)
  231. if self.temporalType == 'absolute':
  232. self.axes2d.xaxis_date()
  233. self.fig.autofmt_xdate()
  234. convert = mdates.date2num
  235. else:
  236. convert = lambda x: x
  237. colors = cycle(COLORS)
  238. yticksNames = []
  239. yticksPos = []
  240. plots = []
  241. lookUp = LookUp(self.timeData)
  242. for i, name in enumerate(self.datasets):
  243. yticksNames.append(name[0]) # just name; with mapset it would be long
  244. name = name[0] + '@' + name[1]
  245. yticksPos.append(i)
  246. barData = []
  247. pointData = []
  248. mapType = self.timeData[name]['temporalMapType']
  249. start = convert(self.timeData[name]['start_datetime'])
  250. # TODO: mixed
  251. if mapType == 'interval':
  252. end = convert(self.timeData[name]['end_datetime'])
  253. lookUpData = zip(start, end)
  254. duration = end - np.array(start)
  255. barData = zip(start, duration)
  256. lookUp.AddDataset(type_='bar', yrange=(i - 0.1, i + 0.1),
  257. xranges=lookUpData, datasetName=name)
  258. else:
  259. # self.timeData[name]['end_plot'] = None
  260. pointData = start
  261. lookUp.AddDataset(type_='point', yrange=i, xranges=pointData, datasetName=name)
  262. color = colors.next()
  263. if mapType == 'interval':
  264. plots.append(self.axes2d.broken_barh(xranges=barData, yrange=(i - 0.1, 0.2),
  265. facecolors=color, alpha=ALPHA))
  266. else:
  267. plots.append(self.axes2d.plot(pointData, [i] * len(pointData),
  268. marker='o', linestyle='None', color=color)[0])
  269. if self.temporalType == 'absolute':
  270. pass
  271. # self.axes2d.set_xlabel(_("Time"))
  272. else:
  273. self.axes2d.set_xlabel(_("Time [%s]") % self.unit)
  274. self.axes2d.set_yticks(yticksPos)
  275. self.axes2d.set_yticklabels(yticksNames)
  276. self.axes2d.set_ylim(min(yticksPos) - 1, max(yticksPos) + 1)
  277. # adjust xlim
  278. xlim = self.axes2d.get_xlim()
  279. padding = ceil((xlim[1] - xlim[0]) / 20.)
  280. self.axes2d.set_xlim(xlim[0] - padding, xlim[1] + padding)
  281. self.canvas.draw()
  282. DataCursor(plots, lookUp, InfoFormat)
  283. def OnRedraw(self, event):
  284. """!Required redrawing."""
  285. datasets = self.datasetSelect.GetValue().strip()
  286. if not datasets:
  287. return
  288. datasets = datasets.split(',')
  289. try:
  290. datasets = self._checkDatasets(datasets)
  291. except GException:
  292. GError(parent=self, message=_("Invalid input data"))
  293. return
  294. self.datasets = datasets
  295. self._redraw()
  296. def _redraw(self):
  297. """!Readraw data.
  298. Decides if to draw also 3D and adjusts layout if needed.
  299. """
  300. self._getData(self.datasets)
  301. # axes3d are physically removed
  302. if not self.axes2d:
  303. self.axes2d = self.fig.add_subplot(1, 1, 1)
  304. self._draw2dFigure()
  305. if check_version(1, 0, 0):
  306. if self.view3dCheck.IsChecked():
  307. self.axes2d.change_geometry(2, 1, 1)
  308. if not self.axes3d:
  309. # do not remove this import - unused but it is required for 3D
  310. from mpl_toolkits.mplot3d import Axes3D # pylint: disable=W0611
  311. self.axes3d = self.fig.add_subplot(2, 1, 2, projection='3d')
  312. self.axes3d.set_visible(True)
  313. self._draw3dFigure()
  314. else:
  315. if self.axes3d:
  316. self.fig.delaxes(self.axes3d)
  317. self.axes3d = None
  318. self.axes2d.change_geometry(1, 1, 1)
  319. self.canvas.draw()
  320. def _checkDatasets(self, datasets):
  321. """!Checks and validates datasets.
  322. Reports also type of dataset (e.g. 'strds').
  323. @return (mapName, mapset, type)
  324. """
  325. validated = []
  326. tDict = tgis.tlist_grouped('stds', group_type=True, dbif=self.dbif)
  327. # nested list with '(map, mapset, etype)' items
  328. allDatasets = [[[(map, mapset, etype) for map in maps]
  329. for etype, maps in etypesDict.iteritems()]
  330. for mapset, etypesDict in tDict.iteritems()]
  331. # flatten this list
  332. allDatasets = reduce(lambda x, y: x + y, reduce(lambda x, y: x + y, allDatasets))
  333. for dataset in datasets:
  334. errorMsg = _("Space time dataset <%s> not found.") % dataset
  335. if dataset.find("@") >= 0:
  336. nameShort, mapset = dataset.split('@', 1)
  337. indices = [n for n, (mapName, mapsetName, etype) in enumerate(allDatasets)
  338. if nameShort == mapName and mapsetName == mapset]
  339. else:
  340. indices = [n for n, (mapName, mapset, etype) in enumerate(allDatasets)
  341. if dataset == mapName]
  342. if len(indices) == 0:
  343. raise GException(errorMsg)
  344. elif len(indices) >= 2:
  345. dlg = wx.SingleChoiceDialog(self,
  346. message=_("Please specify the space time dataset <%s>." % dataset),
  347. caption=_("Ambiguous dataset name"),
  348. choices=[("%(map)s@%(mapset)s: %(etype)s" % {'map': allDatasets[i][0],
  349. 'mapset': allDatasets[i][1],
  350. 'etype': allDatasets[i][2]})
  351. for i in indices],
  352. style=wx.CHOICEDLG_STYLE | wx.OK)
  353. if dlg.ShowModal() == wx.ID_OK:
  354. index = dlg.GetSelection()
  355. validated.append(allDatasets[indices[index]])
  356. else:
  357. validated.append(allDatasets[indices[0]])
  358. return validated
  359. def OnHelp(self, event):
  360. RunCommand('g.manual', quiet=True, entry='g.gui.timeline')
  361. # interface
  362. def SetDatasets(self, datasets):
  363. """!Set data"""
  364. if not datasets:
  365. return
  366. try:
  367. datasets = self._checkDatasets(datasets)
  368. except GException:
  369. GError(parent=self, message=_("Invalid input data"))
  370. return
  371. self.datasets = datasets
  372. self.datasetSelect.SetValue(','.join(map(lambda x: x[0] + '@' + x[1], datasets)))
  373. self._redraw()
  374. def Show3D(self, show):
  375. """!Show also 3D if possible"""
  376. if check_version(1, 0, 0):
  377. self.view3dCheck.SetValue(show)
  378. class LookUp:
  379. """!Helper class for searching info by coordinates"""
  380. def __init__(self, timeData):
  381. self.data = {}
  382. self.timeData = timeData
  383. def AddDataset(self, type_, yrange, xranges, datasetName):
  384. if type_ == 'bar':
  385. self.data[yrange] = {'name': datasetName}
  386. for i, (start, end) in enumerate(xranges):
  387. self.data[yrange][(start, end)] = i
  388. elif type_ == 'point':
  389. self.data[(yrange, yrange)] = {'name': datasetName}
  390. for i, start in enumerate(xranges):
  391. self.data[(yrange, yrange)][(start, start)] = i
  392. def GetInformation(self, x, y):
  393. keys = None
  394. for keyY in self.data.keys():
  395. if keyY[0] <= y <= keyY[1]:
  396. for keyX in self.data[keyY].keys():
  397. if keyX != 'name' and keyX[0] <= x <= keyX[1]:
  398. keys = keyY, keyX
  399. break
  400. if keys:
  401. break
  402. if not keys:
  403. return None
  404. datasetName = self.data[keys[0]]['name']
  405. mapIndex = self.data[keys[0]][keys[1]]
  406. return self.timeData, datasetName, mapIndex
  407. def InfoFormat(timeData, datasetName, mapIndex):
  408. """!Formats information about dataset"""
  409. text = []
  410. etype = timeData[datasetName]['elementType']
  411. name, mapset = datasetName.split('@')
  412. if etype == 'strds':
  413. text.append(_("Space time raster dataset: %s") % name)
  414. elif etype == 'stvds':
  415. text.append(_("Space time vector dataset: %s") % name)
  416. elif etype == 'str3ds':
  417. text.append(_("Space time 3D raster dataset: %s") % name)
  418. text.append(_("Mapset: %s") % mapset)
  419. text.append(_("Map name: %s") % timeData[datasetName]['names'][mapIndex])
  420. text.append(_("Start time: %s") % timeData[datasetName]['start_datetime'][mapIndex])
  421. text.append(_("End time: %s") % timeData[datasetName]['end_datetime'][mapIndex])
  422. if not timeData[datasetName]['validTopology']:
  423. text.append(_("WARNING: invalid topology"))
  424. text.append(_("\nPress Del to dismiss."))
  425. return '\n'.join(text)
  426. class DataCursor(object):
  427. """A simple data cursor widget that displays the x,y location of a
  428. matplotlib artist when it is selected.
  429. Source: http://stackoverflow.com/questions/4652439/
  430. is-there-a-matplotlib-equivalent-of-matlabs-datacursormode/4674445
  431. """
  432. def __init__(self, artists, lookUp, formatFunction, tolerance=5, offsets=(-30, 30),
  433. display_all=False):
  434. """Create the data cursor and connect it to the relevant figure.
  435. "artists" is the matplotlib artist or sequence of artists that will be
  436. selected.
  437. "tolerance" is the radius (in points) that the mouse click must be
  438. within to select the artist.
  439. "offsets" is a tuple of (x,y) offsets in points from the selected
  440. point to the displayed annotation box
  441. "display_all" controls whether more than one annotation box will
  442. be shown if there are multiple axes. Only one will be shown
  443. per-axis, regardless.
  444. """
  445. self.lookUp = lookUp
  446. self.formatFunction = formatFunction
  447. self.offsets = offsets
  448. self.display_all = display_all
  449. if not cbook.iterable(artists):
  450. artists = [artists]
  451. self.artists = artists
  452. self.axes = tuple(set(art.axes for art in self.artists))
  453. self.figures = tuple(set(ax.figure for ax in self.axes))
  454. self.annotations = {}
  455. for ax in self.axes:
  456. self.annotations[ax] = self.annotate(ax)
  457. for artist in self.artists:
  458. artist.set_picker(tolerance)
  459. for fig in self.figures:
  460. fig.canvas.mpl_connect('pick_event', self)
  461. fig.canvas.mpl_connect('key_press_event', self.keyPressed)
  462. def keyPressed(self, event):
  463. """!Key pressed - hide annotation if Delete was pressed"""
  464. if event.key != 'delete':
  465. return
  466. for ax in self.axes:
  467. self.annotations[ax].set_visible(False)
  468. event.canvas.draw()
  469. def annotate(self, ax):
  470. """Draws and hides the annotation box for the given axis "ax"."""
  471. annotation = ax.annotate(self.formatFunction, xy=(0, 0), ha='center',
  472. xytext=self.offsets, textcoords='offset points', va='bottom',
  473. bbox=dict(boxstyle='round,pad=0.5', fc='yellow', alpha=0.7),
  474. arrowprops=dict(arrowstyle='->', connectionstyle='arc3,rad=0'),
  475. annotation_clip=False, multialignment='left')
  476. annotation.set_visible(False)
  477. return annotation
  478. def __call__(self, event):
  479. """Intended to be called through "mpl_connect"."""
  480. # Rather than trying to interpolate, just display the clicked coords
  481. # This will only be called if it's within "tolerance", anyway.
  482. x, y = event.mouseevent.xdata, event.mouseevent.ydata
  483. annotation = self.annotations[event.artist.axes]
  484. if x is not None:
  485. if not self.display_all:
  486. # Hide any other annotation boxes...
  487. for ann in self.annotations.values():
  488. ann.set_visible(False)
  489. # Update the annotation in the current axis..
  490. annotation.xy = x, y
  491. if 'Line2D' in str(type(event.artist)):
  492. y = event.artist.get_ydata()[0]
  493. xData = event.artist.get_xdata()
  494. x = xData[np.argmin(abs(xData - x))]
  495. info = self.lookUp.GetInformation(x, y)
  496. if not info:
  497. return
  498. text = self.formatFunction(*info)
  499. annotation.set_text(text)
  500. annotation.set_visible(True)
  501. event.canvas.draw()
  502. def run(parent=None, datasets=None):
  503. frame = TimelineFrame(parent)
  504. if datasets:
  505. frame.SetDatasets(datasets)
  506. frame.Show()
  507. if __name__ == '__main__':
  508. run()