123456789101112131415161718192021222324252627282930313233343536373839404142434445464748495051525354555657585960616263646566676869707172737475767778798081828384858687888990919293949596979899100101102103104105106107108109110111112113114115116117118119120121122123124125126127128129130131132133134135136137138139140141142143144145146147148149150151152153154155156157158159160161162163164165166167168169170171172173174175176177178179180181182183184185186187188189190191192193194195196197198199200201202203204205206207208209210211212213214215216217218219220221222223224225226227228229230231232233234235236237238239240241242243244245246247248249250251252253254255256257258259260261262263264 |
- /* PURPOSE: Parse and validate the input */
- #include <stdlib.h>
- #include <string.h>
- #include <grass/gis.h>
- #include <grass/glocale.h>
- #include <grass/raster.h>
- #include "iseg.h"
- int parse_args(int argc, char *argv[], struct globals *globals)
- {
- struct Option *group, *seeds, *bounds, *output,
- *method, *similarity, *threshold, *min_segment_size,
- #ifdef _OR_SHAPE_
- *shape_weight, *smooth_weight,
- #endif
- *mem;
- struct Flag *diagonal, *weighted;
- struct Option *outband, *endt;
- /* required parameters */
- group = G_define_standard_option(G_OPT_I_GROUP);
- output = G_define_standard_option(G_OPT_R_OUTPUT);
- threshold = G_define_option();
- threshold->key = "threshold";
- threshold->type = TYPE_DOUBLE;
- threshold->required = YES;
- threshold->label = _("Difference threshold between 0 and 1");
- threshold->description = _("Threshold = 0 merges only identical segments; threshold = 1 merges all");
- /* optional parameters */
- method = G_define_option();
- method->key = "method";
- method->type = TYPE_STRING;
- method->required = NO;
- method->answer = "region_growing";
- method->options = "region_growing";
- method->description = _("Segmentation method");
- method->guisection = _("Settings");
- similarity = G_define_option();
- similarity->key = "similarity";
- similarity->type = TYPE_STRING;
- similarity->required = NO;
- similarity->answer = "euclidean";
- similarity->options = "euclidean,manhattan";
- similarity->description = _("Similarity calculation method");
- similarity->guisection = _("Settings");
- min_segment_size = G_define_option();
- min_segment_size->key = "minsize";
- min_segment_size->type = TYPE_INTEGER;
- min_segment_size->required = NO;
- min_segment_size->answer = "1";
- min_segment_size->options = "1-100000";
- min_segment_size->label = _("Minimum number of cells in a segment");
- min_segment_size->description =
- _("The final step will merge small segments with their best neighbor");
- min_segment_size->guisection = _("Settings");
- #ifdef _OR_SHAPE_
- radio_weight = G_define_option();
- radio_weight->key = "radio_weight";
- radio_weight->type = TYPE_DOUBLE;
- radio_weight->required = NO;
- radio_weight->answer = "1";
- radio_weight->options = "0-1";
- radio_weight->label =
- _("Importance of radiometric (input raster) values relative to shape");
- radio_weight->guisection = _("Settings");
- smooth_weight = G_define_option();
- smooth_weight->key = "smooth_weight";
- smooth_weight->type = TYPE_DOUBLE;
- smooth_weight->required = NO;
- smooth_weight->answer = "0.5";
- smooth_weight->options = "0-1";
- smooth_weight->label =
- _("Importance of smoothness relative to compactness");
- smooth_weight->guisection = _("Settings");
- #endif
- mem = G_define_option();
- mem->key = "memory";
- mem->type = TYPE_INTEGER;
- mem->required = NO;
- mem->answer = "300";
- mem->description = _("Memory in MB");
- /* TODO input for distance function */
- /* debug parameters */
- endt = G_define_option();
- endt->key = "iterations";
- endt->type = TYPE_INTEGER;
- endt->required = NO;
- endt->answer = "20";
- endt->description = _("Maximum number of iterations");
- endt->guisection = _("Settings");
- /* Using raster for seeds
- * Low priority TODO: allow vector points/centroids seed input. */
- seeds = G_define_standard_option(G_OPT_R_INPUT);
- seeds->key = "seeds";
- seeds->required = NO;
- seeds->description = _("Name for input raster map with starting seeds");
- /* Polygon constraints. */
- bounds = G_define_standard_option(G_OPT_R_INPUT);
- bounds->key = "bounds";
- bounds->required = NO;
- bounds->label = _("Name for input bounding/constraining raster map");
- bounds->description =
- _("Must be integer values, each area will be segmented independent of the others");
- outband = G_define_standard_option(G_OPT_R_OUTPUT);
- outband->key = "goodness";
- outband->required = NO;
- outband->description =
- _("Name for output goodness of fit estimate");
- diagonal = G_define_flag();
- diagonal->key = 'd';
- diagonal->description =
- _("Use 8 neighbors (3x3 neighborhood) instead of the default 4 neighbors for each pixel");
- diagonal->guisection = _("Settings");
- weighted = G_define_flag();
- weighted->key = 'w';
- weighted->description =
- _("Weighted input, don't perform the default scaling of input raster maps");
- weighted->guisection = _("Settings");
- if (G_parser(argc, argv))
- exit(EXIT_FAILURE);
- /* Check and save parameters */
- globals->image_group = group->answer;
- if (G_legal_filename(output->answer) == TRUE)
- globals->out_name = output->answer;
- else
- G_fatal_error("Invalid output raster name");
- /* Note: this threshold is scaled after we know more at the beginning of create_isegs() */
- globals->alpha = atof(threshold->answer);
- if (globals->alpha <= 0 || globals->alpha >= 1)
- G_fatal_error(_("Threshold should be >= 0 and <= 1"));
- /* segmentation methods: 1 = region growing */
- if (strcmp(method->answer, "region_growing") == 0)
- globals->method = 1;
- else
- G_fatal_error(_("Unable to assign segmentation method"));
- G_debug(1, "segmentation method: %d", globals->method);
- /* distance methods for similarity measurement */
- if (strcmp(similarity->answer, "euclidean") == 0)
- globals->calculate_similarity = calculate_euclidean_similarity;
- else if (strcmp(similarity->answer, "manhattan") == 0)
- globals->calculate_similarity = calculate_manhattan_similarity;
- else
- G_fatal_error(_("Invalid similarity method"));
- #ifdef _OR_SHAPE_
- /* consider shape */
- globals->radio_weight = atof(radio_weight->answer);
- if (globals->radio_weight <= 0)
- G_fatal_error(_("Option '%s' must be > 0"), radio_weight->key);
- if (globals->radio_weight > 1)
- G_fatal_error(_("Option '%s' must be <= 1"), radio_weight->key);
- globals->smooth_weight = atof(smooth_weight->answer);
- if (globals->smooth_weight < 0)
- G_fatal_error(_("Option '%s' must be >= 0"), smooth_weight->key);
- if (globals->smooth_weight > 1)
- G_fatal_error(_("Option '%s' must be <= 1"), smooth_weight->key);
- #else
- globals->radio_weight = 1;
- globals->smooth_weight = 0.5;
- #endif
- globals->min_segment_size = atoi(min_segment_size->answer);
- if (diagonal->answer == FALSE) {
- globals->find_neighbors = find_four_neighbors;
- globals->nn = 4;
- G_debug(1, "four pixel neighborhood");
- }
- else if (diagonal->answer == TRUE) {
- globals->find_neighbors = find_eight_neighbors;
- globals->nn = 8;
- G_debug(1, "eight (3x3) pixel neighborhood");
- }
- /* default/0 for performing the scaling
- * selected/1 if scaling should be skipped. */
- globals->weighted = weighted->answer;
- globals->seeds = seeds->answer;
- if (globals->seeds) {
- if (G_find_raster(globals->seeds, "") == NULL) {
- G_fatal_error(_("Seeds raster map not found"));
- }
- if (Rast_map_type(globals->seeds, "") !=
- CELL_TYPE) {
- G_fatal_error(_("Seeeds raster map must be CELL type (integers)"));
- }
- }
- if (bounds->answer == NULL) {
- globals->bounds_map = NULL;
- }
- else {
- globals->bounds_map = bounds->answer;
- if ((globals->bounds_mapset = G_find_raster(globals->bounds_map, "")) == NULL) {
- G_fatal_error(_("Segmentation constraint/boundary raster map not found"));
- }
- if (Rast_map_type(globals->bounds_map, globals->bounds_mapset) !=
- CELL_TYPE) {
- G_fatal_error(_("Segmentation constraint raster map must be CELL type (integers)"));
- }
- }
- /* other data */
- globals->nrows = Rast_window_rows();
- globals->ncols = Rast_window_cols();
- /* debug help */
- if (outband->answer == NULL)
- globals->out_band = NULL;
- else {
- if (G_legal_filename(outband->answer) == TRUE)
- globals->out_band = outband->answer;
- else
- G_fatal_error(_("Invalid output raster name for goodness of fit"));
- }
- if (endt->answer) {
- if (atoi(endt->answer) > 0)
- globals->end_t = atoi(endt->answer);
- else {
- globals->end_t = 100;
- G_warning(_("Invalid number of iterations, 100 will be used"));
- }
- }
- else
- globals->end_t = 1000;
- if (mem->answer && atoi(mem->answer) > 10)
- globals->mb = atoi(mem->answer);
- else {
- globals->mb = 300;
- G_warning(_("Invalid number of MB, 300 will be used"));
- }
- return TRUE;
- }
|