scatter.py 11 KB

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  1. """
  2. @package wxplot.scatter
  3. @brief Scatter plotting using PyPlot
  4. Classes:
  5. - scatter::ScatterFrame
  6. - scatter::ScatterToolbar
  7. (C) 2011 by the GRASS Development Team
  8. This program is free software under the GNU General Public License
  9. (>=v2). Read the file COPYING that comes with GRASS for details.
  10. @author Michael Barton, Arizona State University
  11. """
  12. import sys
  13. import wx
  14. import grass.script as grass
  15. import gui_core.wxlibplot as plot
  16. from wxplot.base import BasePlotFrame, PlotIcons
  17. from gui_core.toolbars import BaseToolbar, BaseIcons
  18. from wxplot.dialogs import ScatterRasterDialog, PlotStatsFrame
  19. from core.gcmd import RunCommand, GException, GError, GMessage
  20. from core.utils import _
  21. class ScatterFrame(BasePlotFrame):
  22. """Mainframe for displaying bivariate scatter plot of two raster maps. Uses wx.lib.plot.
  23. """
  24. def __init__(self, parent, id=wx.ID_ANY, style=wx.DEFAULT_FRAME_STYLE,
  25. size=wx.Size(700, 400),
  26. rasterList=[], **kwargs):
  27. BasePlotFrame.__init__(self, parent, size=size, **kwargs)
  28. self.toolbar = ScatterToolbar(parent=self)
  29. # workaround for http://trac.wxwidgets.org/ticket/13888
  30. if sys.platform != 'darwin':
  31. self.SetToolBar(self.toolbar)
  32. self.SetTitle(_("GRASS Bivariate Scatterplot Tool"))
  33. #
  34. # Init variables
  35. #
  36. self.rasterList = rasterList
  37. self.plottype = 'scatter'
  38. self.ptitle = _('Bivariate Scatterplot') # title of window
  39. self.xlabel = _("Raster cell values") # default X-axis label
  40. self.ylabel = _("Raster cell values") # default Y-axis label
  41. self.maptype = 'raster' # default type of scatterplot
  42. self.scattertype = 'normal'
  43. self.bins = 255
  44. self.colorList = [
  45. "blue",
  46. "red",
  47. "black",
  48. "green",
  49. "yellow",
  50. "magenta",
  51. "cyan",
  52. "aqua",
  53. "grey",
  54. "orange",
  55. "brown",
  56. "purple",
  57. "violet",
  58. "indigo"]
  59. self._initOpts()
  60. if len(
  61. self.rasterList) > 1: # set raster name(s) from layer manager if a map is selected
  62. self.InitRasterOpts(self.rasterList, 'scatter')
  63. else:
  64. self.raster = {}
  65. def _initOpts(self):
  66. """Initialize plot options
  67. """
  68. self.InitPlotOpts('scatter')
  69. def OnCreateScatter(self, event):
  70. """Main routine for creating a scatterplot. Uses r.stats to
  71. create a list of cell value pairs. This is passed to
  72. plot to create a scatterplot.
  73. """
  74. self.SetCursor(wx.StockCursor(wx.CURSOR_ARROW))
  75. self.SetGraphStyle()
  76. wx.BeginBusyCursor()
  77. wx.SafeYield()
  78. self.SetupScatterplot()
  79. p = self.CreatePlotList()
  80. if p:
  81. self.DrawPlot(p)
  82. wx.EndBusyCursor()
  83. else:
  84. wx.EndBusyCursor()
  85. GMessage(_("Nothing to plot."), parent=self)
  86. def OnSelectRaster(self, event):
  87. """Select raster map(s) to profile
  88. """
  89. dlg = ScatterRasterDialog(parent=self)
  90. dlg.CenterOnParent()
  91. if dlg.ShowModal() == wx.ID_OK:
  92. self.rasterList = dlg.GetRasterPairs()
  93. if not self.rasterList:
  94. GMessage(
  95. _("At least 2 raster maps must be specified"),
  96. parent=dlg)
  97. return
  98. # scatterplot or bubbleplot
  99. # bins for r.stats with float and dcell maps
  100. self.scattertype, self.bins = dlg.GetSettings()
  101. self.raster = self.InitRasterPairs(
  102. self.rasterList, 'scatter') # dictionary of raster pairs
  103. # plot histogram
  104. if self.rasterList:
  105. self.OnCreateScatter(event=None)
  106. dlg.Destroy()
  107. def SetupScatterplot(self):
  108. """Build data list for ploting each raster
  109. """
  110. #
  111. # initialize title string
  112. #
  113. self.ptitle = _('Bivariate Scatterplot of ')
  114. #
  115. # create a datalist for plotting for each raster pair
  116. #
  117. if len(self.rasterList) == 0:
  118. return # at least 1 pair of maps needed to plot
  119. for rpair in self.rasterList:
  120. self.raster[rpair]['datalist'] = self.CreateDatalist(rpair)
  121. # update title
  122. self.ptitle += '%s vs %s, ' % (
  123. rpair[0].split('@')[0],
  124. rpair[1].split('@')[0])
  125. self.ptitle = self.ptitle.strip(', ')
  126. #
  127. # set xlabel & ylabel based on raster maps of first pair to be plotted
  128. #
  129. self.xlabel = _('Raster <%s> cell values') % rpair[0].split('@')[0]
  130. self.ylabel = _('Raster <%s> cell values') % rpair[1].split('@')[0]
  131. units = self.raster[self.rasterList[0]][0]['units']
  132. if units != '':
  133. self.xlabel += _(': %s') % units
  134. units = self.raster[self.rasterList[0]][1]['units']
  135. if units != '':
  136. self.ylabel += _(': %s') % units
  137. def CreateDatalist(self, rpair):
  138. """Build a list of cell value, frequency pairs for histogram
  139. frequency can be in cell counts, percents, or area
  140. """
  141. datalist = []
  142. if self.scattertype == 'bubble':
  143. freqflag = 'cn'
  144. else:
  145. freqflag = 'n'
  146. try:
  147. ret = RunCommand("r.stats",
  148. parent=self,
  149. input='%s,%s' % rpair,
  150. flags=freqflag,
  151. nsteps=self.bins,
  152. sep=',',
  153. quiet=True,
  154. read=True)
  155. if not ret:
  156. return datalist
  157. for line in ret.splitlines():
  158. rast1, rast2 = line.strip().split(',')
  159. rast1 = rast1.strip()
  160. if '-' in rast1:
  161. if rast1[0] == '-':
  162. rast1 = '-' + rast1.split('-')[1]
  163. else:
  164. rast1 = rast1.split('-')[0]
  165. rast2 = rast2.strip()
  166. if '-' in rast2:
  167. if rast2[0] == '-':
  168. rast2 = '-' + rast2.split('-')[1]
  169. else:
  170. rast2 = rast2.split('-')[0]
  171. rast1 = rast1.encode('ascii', 'ignore')
  172. rast2 = rast2.encode('ascii', 'ignore')
  173. datalist.append((rast1, rast2))
  174. return datalist
  175. except GException as e:
  176. GError(parent=self,
  177. message=e.value)
  178. return None
  179. def CreatePlotList(self):
  180. """Make list of elements to plot
  181. """
  182. # graph the cell value, frequency pairs for the histogram
  183. self.plotlist = []
  184. for rpair in self.rasterList:
  185. if 'datalist' not in self.raster[rpair] or \
  186. self.raster[rpair]['datalist'] is None:
  187. continue
  188. if len(self.raster[rpair]['datalist']) > 0:
  189. col = wx.Colour(self.raster[rpair]['pcolor'][0],
  190. self.raster[rpair]['pcolor'][1],
  191. self.raster[rpair]['pcolor'][2],
  192. 255)
  193. scatterpoints = plot.PolyMarker(
  194. self.raster[rpair]['datalist'],
  195. legend=' ' + self.raster[rpair]['plegend'],
  196. colour=col, size=self.raster[rpair]['psize'],
  197. fillstyle=self.ptfilldict[self.raster[rpair]['pfill']],
  198. marker=self.raster[rpair]['ptype'])
  199. self.plotlist.append(scatterpoints)
  200. return self.plotlist
  201. def Update(self):
  202. """Update histogram after changing options
  203. """
  204. self.SetGraphStyle()
  205. p = self.CreatePlotList()
  206. if p:
  207. self.DrawPlot(p)
  208. else:
  209. GMessage(_("Nothing to plot."), parent=self)
  210. def OnRegression(self, event):
  211. """Displays regression information in messagebox
  212. """
  213. message = []
  214. title = _('Regression Statistics for Scatterplot(s)')
  215. for rpair in self.rasterList:
  216. if isinstance(rpair, tuple) == False:
  217. continue
  218. rast1, rast2 = rpair
  219. rast1 = rast1.split('@')[0]
  220. rast2 = rast2.split('@')[0]
  221. ret = grass.parse_command(
  222. 'r.regression.line', mapx=rast1, mapy=rast2, flags='g',
  223. quiet=True, parse=(grass.parse_key_val, {'sep': '='}))
  224. eqtitle = _('Regression equation for raster map <%(rast1)s> vs. <%(rast2)s>:\n\n') % {
  225. 'rast1': rast1, 'rast2': rast2}
  226. eq = ' %s = %s + %s(%s)\n\n' % (rast2, ret['a'], ret['b'], rast1)
  227. num = 'N = %s\n' % ret['N']
  228. rval = 'R = %s\n' % ret['R']
  229. rsq = 'R-squared = %f\n' % pow(float(ret['R']), 2)
  230. ftest = 'F = %s\n' % ret['F']
  231. str = eqtitle + eq + num + rval + rsq + ftest
  232. message.append(str)
  233. stats = PlotStatsFrame(self, id=wx.ID_ANY, message=message,
  234. title=title)
  235. if stats.Show() == wx.ID_CLOSE:
  236. stats.Destroy()
  237. class ScatterToolbar(BaseToolbar):
  238. """Toolbar for bivariate scatterplots of raster map pairs
  239. """
  240. def __init__(self, parent):
  241. BaseToolbar.__init__(self, parent)
  242. # workaround for http://trac.wxwidgets.org/ticket/13888
  243. if sys.platform == 'darwin':
  244. parent.SetToolBar(self)
  245. self.InitToolbar(self._toolbarData())
  246. # realize the toolbar
  247. self.Realize()
  248. def _toolbarData(self):
  249. """Toolbar data"""
  250. return self._getToolbarData((('addraster', BaseIcons["addRast"],
  251. self.parent.OnSelectRaster),
  252. (None, ),
  253. ('draw', PlotIcons["draw"],
  254. self.parent.OnCreateScatter),
  255. ('erase', BaseIcons["erase"],
  256. self.parent.OnErase),
  257. ('drag', BaseIcons['pan'],
  258. self.parent.OnDrag),
  259. ('zoom', BaseIcons['zoomIn'],
  260. self.parent.OnZoom),
  261. ('unzoom', BaseIcons['zoomBack'],
  262. self.parent.OnRedraw),
  263. (None, ),
  264. ('statistics', PlotIcons['statistics'],
  265. self.parent.OnRegression),
  266. ('image', BaseIcons["saveFile"],
  267. self.parent.SaveToFile),
  268. ('print', BaseIcons["print"],
  269. self.parent.PrintMenu),
  270. (None, ),
  271. ('settings', PlotIcons["options"],
  272. self.parent.PlotOptionsMenu),
  273. ('quit', PlotIcons["quit"],
  274. self.parent.OnQuit),
  275. ))