core_c.py 7.1 KB

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  1. """!
  2. @package iscatt.core_c
  3. @brief Wrappers for scatter plot C backend.
  4. (C) 2013 by the GRASS Development Team
  5. This program is free software under the GNU General Public License
  6. (>=v2). Read the file COPYING that comes with GRASS for details.
  7. @author Stepan Turek <stepan.turek seznam.cz> (mentor: Martin Landa)
  8. """
  9. import sys
  10. import numpy as np
  11. from multiprocessing import Process, Queue
  12. from ctypes import *
  13. try:
  14. from grass.lib.imagery import *
  15. from grass.lib.gis import Cell_head, G_get_window
  16. except ImportError, e:
  17. sys.stderr.write(_("Loading ctypes libs failed"))
  18. from core.gcmd import GException
  19. def Rasterize(polygon, rast, region, value):
  20. rows, cols = rast.shape
  21. #TODO creating of region is on many places
  22. region['rows'] = rows
  23. region['cols'] = cols
  24. region['nsres'] = 1.0
  25. region['ewres'] = 1.0
  26. q = Queue()
  27. p = Process(target=_rasterize, args=(polygon, rast, region, value, q))
  28. p.start()
  29. rast = q.get()
  30. p.join()
  31. return rast
  32. def ApplyColormap(vals, vals_mask, colmap, out_vals):
  33. c_uint8_p = POINTER(c_uint8)
  34. vals_p = vals.ctypes.data_as(c_uint8_p)
  35. if hasattr(vals_mask, "ctypes"):
  36. vals_mask_p = vals_mask.ctypes.data_as(c_uint8_p)
  37. else: #vals mask is empty (all data are selected)
  38. vals_mask_p = None
  39. colmap_p = colmap.ctypes.data_as(c_uint8_p)
  40. out_vals_p = out_vals.ctypes.data_as(c_uint8_p)
  41. vals_size = vals.reshape((-1)).shape[0]
  42. I_apply_colormap(vals_p, vals_mask_p, vals_size, colmap_p, out_vals_p)
  43. def MergeArrays(merged_arr, overlay_arr, alpha):
  44. if merged_arr.shape != overlay_arr.shape:
  45. GException("MergeArrays: merged_arr.shape != overlay_arr.shape")
  46. c_uint8_p = POINTER(c_uint8)
  47. merged_p = merged_arr.ctypes.data_as(c_uint8_p)
  48. overlay_p = overlay_arr.ctypes.data_as(c_uint8_p)
  49. I_merge_arrays(merged_p, overlay_p, merged_arr.shape[0], merged_arr.shape[1], alpha)
  50. def MergeArrays(merged_arr, overlay_arr, alpha):
  51. if merged_arr.shape != overlay_arr.shape:
  52. GException("MergeArrays: merged_arr.shape != overlay_arr.shape")
  53. c_uint8_p = POINTER(c_uint8)
  54. merged_p = merged_arr.ctypes.data_as(c_uint8_p)
  55. overlay_p = overlay_arr.ctypes.data_as(c_uint8_p)
  56. I_merge_arrays(merged_p, overlay_p, merged_arr.shape[0], merged_arr.shape[1], alpha)
  57. def ComputeScatts(region, scatt_conds, bands, n_bands, scatts, cats_rasts_conds, cats_rasts):
  58. q = Queue()
  59. p = Process(target=_computeScattsProcess, args=(region, scatt_conds, bands,
  60. n_bands, scatts, cats_rasts_conds, cats_rasts, q))
  61. p.start()
  62. ret = q.get()
  63. p.join()
  64. return ret[0], ret[1]
  65. def UpdateCatRast(patch_rast, region, cat_rast):
  66. q = Queue()
  67. p = Process(target=_updateCatRastProcess, args=(patch_rast, region, cat_rast, q))
  68. p.start()
  69. ret = q.get()
  70. p.join()
  71. return ret
  72. def CreateCatRast(region, cat_rast):
  73. cell_head = _regionToCellHead(region)
  74. I_create_cat_rast(pointer(cell_head), cat_rast)
  75. def _computeScattsProcess(region, scatt_conds, bands, n_bands, scatts,
  76. cats_rasts_conds, cats_rasts, output_queue):
  77. #TODO names for types not 0 and 1?
  78. sccats_c, cats_rasts_c, refs = _getComputationStruct(scatts, cats_rasts,
  79. SC_SCATT_DATA, n_bands)
  80. scatt_conds_c, cats_rasts_conds_c, refs2 = _getComputationStruct(scatt_conds, cats_rasts_conds,
  81. SC_SCATT_CONDITIONS, n_bands)
  82. char_bands = _stringListToCharArr(bands)
  83. cell_head = _regionToCellHead(region)
  84. ret = I_compute_scatts(pointer(cell_head),
  85. pointer(scatt_conds_c),
  86. pointer(cats_rasts_conds_c),
  87. pointer(char_bands),
  88. n_bands,
  89. pointer(sccats_c),
  90. pointer(cats_rasts_c))
  91. I_sc_free_cats(pointer(sccats_c))
  92. I_sc_free_cats(pointer(scatt_conds_c))
  93. output_queue.put((ret, scatts))
  94. def _getBandcRange( band_info):
  95. band_c_range = struct_Range()
  96. band_c_range.max = band_info['max']
  97. band_c_range.min = band_info['min']
  98. return band_c_range
  99. def _regionToCellHead(region):
  100. cell_head = struct_Cell_head()
  101. G_get_window(pointer(cell_head))
  102. convert_dict = {'n' : 'north', 'e' : 'east',
  103. 'w' : 'west', 's' : 'south',
  104. 'nsres' : 'ns_res',
  105. 'ewres' : 'ew_res'}
  106. for k, v in region.iteritems():
  107. if k in ["rows", "cols", "cells"]:
  108. v = int(v)
  109. else:
  110. v = float(v)
  111. if convert_dict.has_key(k):
  112. k = convert_dict[k]
  113. setattr(cell_head, k, v)
  114. return cell_head
  115. def _stringListToCharArr(str_list):
  116. arr = c_char_p * len(str_list)
  117. char_arr = arr()
  118. for i, st in enumerate(str_list):
  119. if st:
  120. char_arr[i] = st
  121. else:
  122. char_arr[i] = None
  123. return char_arr
  124. def _getComputationStruct(cats, cats_rasts, cats_type, n_bands):
  125. sccats = struct_scCats()
  126. I_sc_init_cats(pointer(sccats), c_int(n_bands), c_int(cats_type));
  127. refs = []
  128. cats_rasts_core = []
  129. for cat_id, scatt_ids in cats.iteritems():
  130. cat_c_id = I_sc_add_cat(pointer(sccats))
  131. cats_rasts_core.append(cats_rasts[cat_id])
  132. for scatt_id, dt in scatt_ids.iteritems():
  133. # if key is missing condition is always True (full scatter plor is computed)
  134. vals = dt['np_vals']
  135. scatt_vals = scdScattData()
  136. c_void_p = ctypes.POINTER(ctypes.c_void_p)
  137. if cats_type == SC_SCATT_DATA:
  138. vals[:] = 0
  139. elif cats_type == SC_SCATT_CONDITIONS:
  140. pass
  141. else:
  142. return None
  143. data_p = vals.ctypes.data_as(c_void_p)
  144. I_scd_init_scatt_data(pointer(scatt_vals), cats_type, len(vals), data_p)
  145. refs.append(scatt_vals)
  146. I_sc_insert_scatt_data(pointer(sccats),
  147. pointer(scatt_vals),
  148. cat_c_id, scatt_id)
  149. cats_rasts_c = _stringListToCharArr(cats_rasts_core)
  150. return sccats, cats_rasts_c, refs
  151. def _updateCatRastProcess(patch_rast, region, cat_rast, output_queue):
  152. cell_head = _regionToCellHead(region)
  153. ret = I_insert_patch_to_cat_rast(patch_rast,
  154. pointer(cell_head),
  155. cat_rast)
  156. output_queue.put(ret)
  157. def _rasterize(polygon, rast, region, value, output_queue):
  158. pol_size = len(polygon) * 2
  159. pol = np.array(polygon, dtype=float)
  160. c_uint8_p = POINTER(c_uint8)
  161. c_double_p = POINTER(c_double)
  162. pol_p = pol.ctypes.data_as(c_double_p)
  163. rast_p = rast.ctypes.data_as(c_uint8_p)
  164. cell_h = _regionToCellHead(region)
  165. I_rasterize(pol_p,
  166. len(polygon),
  167. value,
  168. pointer(cell_h), rast_p)
  169. output_queue.put(rast)