scatter.py 11 KB

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  1. """
  2. @package wxplot.scatter
  3. @brief Scatter plotting using PyPlot
  4. Classes:
  5. - scatter::ScatterFrame
  6. - scatter::ScatterToolbar
  7. (C) 2011 by the GRASS Development Team
  8. This program is free software under the GNU General Public License
  9. (>=v2). Read the file COPYING that comes with GRASS for details.
  10. @author Michael Barton, Arizona State University
  11. """
  12. import sys
  13. import wx
  14. import grass.script as grass
  15. import gui_core.wxlibplot as plot
  16. from wxplot.base import BasePlotFrame, PlotIcons
  17. from gui_core.toolbars import BaseToolbar, BaseIcons
  18. from gui_core.wrap import StockCursor
  19. from wxplot.dialogs import ScatterRasterDialog, PlotStatsFrame
  20. from core.gcmd import RunCommand, GException, GError, GMessage
  21. from core.utils import _
  22. class ScatterFrame(BasePlotFrame):
  23. """Mainframe for displaying bivariate scatter plot of two raster maps. Uses wx.lib.plot.
  24. """
  25. def __init__(self, parent, id=wx.ID_ANY, style=wx.DEFAULT_FRAME_STYLE,
  26. size=wx.Size(700, 400),
  27. rasterList=[], **kwargs):
  28. BasePlotFrame.__init__(self, parent, size=size, **kwargs)
  29. self.toolbar = ScatterToolbar(parent=self)
  30. # workaround for http://trac.wxwidgets.org/ticket/13888
  31. if sys.platform != 'darwin':
  32. self.SetToolBar(self.toolbar)
  33. self.SetTitle(_("GRASS Bivariate Scatterplot Tool"))
  34. #
  35. # Init variables
  36. #
  37. self.rasterList = rasterList
  38. self.plottype = 'scatter'
  39. self.ptitle = _('Bivariate Scatterplot') # title of window
  40. self.xlabel = _("Raster cell values") # default X-axis label
  41. self.ylabel = _("Raster cell values") # default Y-axis label
  42. self.maptype = 'raster' # default type of scatterplot
  43. self.scattertype = 'normal'
  44. self.bins = 255
  45. self.colorList = [
  46. "blue",
  47. "red",
  48. "black",
  49. "green",
  50. "yellow",
  51. "magenta",
  52. "cyan",
  53. "aqua",
  54. "grey",
  55. "orange",
  56. "brown",
  57. "purple",
  58. "violet",
  59. "indigo"]
  60. self._initOpts()
  61. if len(
  62. self.rasterList) > 1: # set raster name(s) from layer manager if a map is selected
  63. self.InitRasterOpts(self.rasterList, 'scatter')
  64. else:
  65. self.raster = {}
  66. def _initOpts(self):
  67. """Initialize plot options
  68. """
  69. self.InitPlotOpts('scatter')
  70. def OnCreateScatter(self, event):
  71. """Main routine for creating a scatterplot. Uses r.stats to
  72. create a list of cell value pairs. This is passed to
  73. plot to create a scatterplot.
  74. """
  75. self.SetCursor(StockCursor(wx.CURSOR_ARROW))
  76. self.SetGraphStyle()
  77. wx.BeginBusyCursor()
  78. wx.SafeYield()
  79. self.SetupScatterplot()
  80. p = self.CreatePlotList()
  81. if p:
  82. self.DrawPlot(p)
  83. wx.EndBusyCursor()
  84. else:
  85. wx.EndBusyCursor()
  86. GMessage(_("Nothing to plot."), parent=self)
  87. def OnSelectRaster(self, event):
  88. """Select raster map(s) to profile
  89. """
  90. dlg = ScatterRasterDialog(parent=self)
  91. dlg.CenterOnParent()
  92. if dlg.ShowModal() == wx.ID_OK:
  93. self.rasterList = dlg.GetRasterPairs()
  94. if not self.rasterList:
  95. GMessage(
  96. _("At least 2 raster maps must be specified"),
  97. parent=dlg)
  98. return
  99. # scatterplot or bubbleplot
  100. # bins for r.stats with float and dcell maps
  101. self.scattertype, self.bins = dlg.GetSettings()
  102. self.raster = self.InitRasterPairs(
  103. self.rasterList, 'scatter') # dictionary of raster pairs
  104. # plot histogram
  105. if self.rasterList:
  106. self.OnCreateScatter(event=None)
  107. dlg.Destroy()
  108. def SetupScatterplot(self):
  109. """Build data list for ploting each raster
  110. """
  111. #
  112. # initialize title string
  113. #
  114. self.ptitle = _('Bivariate Scatterplot of ')
  115. #
  116. # create a datalist for plotting for each raster pair
  117. #
  118. if len(self.rasterList) == 0:
  119. return # at least 1 pair of maps needed to plot
  120. for rpair in self.rasterList:
  121. self.raster[rpair]['datalist'] = self.CreateDatalist(rpair)
  122. # update title
  123. self.ptitle += '%s vs %s, ' % (
  124. rpair[0].split('@')[0],
  125. rpair[1].split('@')[0])
  126. self.ptitle = self.ptitle.strip(', ')
  127. #
  128. # set xlabel & ylabel based on raster maps of first pair to be plotted
  129. #
  130. self.xlabel = _('Raster <%s> cell values') % rpair[0].split('@')[0]
  131. self.ylabel = _('Raster <%s> cell values') % rpair[1].split('@')[0]
  132. units = self.raster[self.rasterList[0]][0]['units']
  133. if units != '':
  134. self.xlabel += _(': %s') % units
  135. units = self.raster[self.rasterList[0]][1]['units']
  136. if units != '':
  137. self.ylabel += _(': %s') % units
  138. def CreateDatalist(self, rpair):
  139. """Build a list of cell value, frequency pairs for histogram
  140. frequency can be in cell counts, percents, or area
  141. """
  142. datalist = []
  143. if self.scattertype == 'bubble':
  144. freqflag = 'cn'
  145. else:
  146. freqflag = 'n'
  147. try:
  148. ret = RunCommand("r.stats",
  149. parent=self,
  150. input='%s,%s' % rpair,
  151. flags=freqflag,
  152. nsteps=self.bins,
  153. sep=',',
  154. quiet=True,
  155. read=True)
  156. if not ret:
  157. return datalist
  158. for line in ret.splitlines():
  159. rast1, rast2 = line.strip().split(',')
  160. rast1 = rast1.strip()
  161. if '-' in rast1:
  162. if rast1[0] == '-':
  163. rast1 = '-' + rast1.split('-')[1]
  164. else:
  165. rast1 = rast1.split('-')[0]
  166. rast2 = rast2.strip()
  167. if '-' in rast2:
  168. if rast2[0] == '-':
  169. rast2 = '-' + rast2.split('-')[1]
  170. else:
  171. rast2 = rast2.split('-')[0]
  172. rast1 = rast1.encode('ascii', 'ignore')
  173. rast2 = rast2.encode('ascii', 'ignore')
  174. datalist.append((rast1, rast2))
  175. return datalist
  176. except GException as e:
  177. GError(parent=self,
  178. message=e.value)
  179. return None
  180. def CreatePlotList(self):
  181. """Make list of elements to plot
  182. """
  183. # graph the cell value, frequency pairs for the histogram
  184. self.plotlist = []
  185. for rpair in self.rasterList:
  186. if 'datalist' not in self.raster[rpair] or \
  187. self.raster[rpair]['datalist'] is None:
  188. continue
  189. if len(self.raster[rpair]['datalist']) > 0:
  190. col = wx.Colour(self.raster[rpair]['pcolor'][0],
  191. self.raster[rpair]['pcolor'][1],
  192. self.raster[rpair]['pcolor'][2],
  193. 255)
  194. scatterpoints = plot.PolyMarker(
  195. self.raster[rpair]['datalist'],
  196. legend=' ' + self.raster[rpair]['plegend'],
  197. colour=col, size=self.raster[rpair]['psize'],
  198. fillstyle=self.ptfilldict[self.raster[rpair]['pfill']],
  199. marker=self.raster[rpair]['ptype'])
  200. self.plotlist.append(scatterpoints)
  201. return self.plotlist
  202. def Update(self):
  203. """Update histogram after changing options
  204. """
  205. self.SetGraphStyle()
  206. p = self.CreatePlotList()
  207. if p:
  208. self.DrawPlot(p)
  209. else:
  210. GMessage(_("Nothing to plot."), parent=self)
  211. def OnRegression(self, event):
  212. """Displays regression information in messagebox
  213. """
  214. message = []
  215. title = _('Regression Statistics for Scatterplot(s)')
  216. for rpair in self.rasterList:
  217. if isinstance(rpair, tuple) == False:
  218. continue
  219. rast1, rast2 = rpair
  220. rast1 = rast1.split('@')[0]
  221. rast2 = rast2.split('@')[0]
  222. ret = grass.parse_command(
  223. 'r.regression.line', mapx=rast1, mapy=rast2, flags='g',
  224. quiet=True, parse=(grass.parse_key_val, {'sep': '='}))
  225. eqtitle = _('Regression equation for raster map <%(rast1)s> vs. <%(rast2)s>:\n\n') % {
  226. 'rast1': rast1, 'rast2': rast2}
  227. eq = ' %s = %s + %s(%s)\n\n' % (rast2, ret['a'], ret['b'], rast1)
  228. num = 'N = %s\n' % ret['N']
  229. rval = 'R = %s\n' % ret['R']
  230. rsq = 'R-squared = %f\n' % pow(float(ret['R']), 2)
  231. ftest = 'F = %s\n' % ret['F']
  232. str = eqtitle + eq + num + rval + rsq + ftest
  233. message.append(str)
  234. stats = PlotStatsFrame(self, id=wx.ID_ANY, message=message,
  235. title=title)
  236. if stats.Show() == wx.ID_CLOSE:
  237. stats.Destroy()
  238. class ScatterToolbar(BaseToolbar):
  239. """Toolbar for bivariate scatterplots of raster map pairs
  240. """
  241. def __init__(self, parent):
  242. BaseToolbar.__init__(self, parent)
  243. # workaround for http://trac.wxwidgets.org/ticket/13888
  244. if sys.platform == 'darwin':
  245. parent.SetToolBar(self)
  246. self.InitToolbar(self._toolbarData())
  247. # realize the toolbar
  248. self.Realize()
  249. def _toolbarData(self):
  250. """Toolbar data"""
  251. return self._getToolbarData((('addraster', BaseIcons["addRast"],
  252. self.parent.OnSelectRaster),
  253. (None, ),
  254. ('draw', PlotIcons["draw"],
  255. self.parent.OnCreateScatter),
  256. ('erase', BaseIcons["erase"],
  257. self.parent.OnErase),
  258. ('drag', BaseIcons['pan'],
  259. self.parent.OnDrag),
  260. ('zoom', BaseIcons['zoomIn'],
  261. self.parent.OnZoom),
  262. ('unzoom', BaseIcons['zoomBack'],
  263. self.parent.OnRedraw),
  264. (None, ),
  265. ('statistics', PlotIcons['statistics'],
  266. self.parent.OnRegression),
  267. ('image', BaseIcons["saveFile"],
  268. self.parent.SaveToFile),
  269. ('print', BaseIcons["print"],
  270. self.parent.PrintMenu),
  271. (None, ),
  272. ('settings', PlotIcons["options"],
  273. self.parent.PlotOptionsMenu),
  274. ('quit', PlotIcons["quit"],
  275. self.parent.OnQuit),
  276. ))