scatter.py 11 KB

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  1. """
  2. @package wxplot.scatter
  3. @brief Scatter plotting using PyPlot
  4. Classes:
  5. - scatter::ScatterFrame
  6. - scatter::ScatterToolbar
  7. (C) 2011 by the GRASS Development Team
  8. This program is free software under the GNU General Public License
  9. (>=v2). Read the file COPYING that comes with GRASS for details.
  10. @author Michael Barton, Arizona State University
  11. """
  12. import sys
  13. import wx
  14. from core.globalvar import CheckWxVersion
  15. try:
  16. if CheckWxVersion(version=[3, 0, 0]):
  17. import gui_core.wxlibplot as plot
  18. else:
  19. import wx.lib.plot as plot
  20. except ImportError as e:
  21. print >> sys.stderr, e
  22. import grass.script as grass
  23. from wxplot.base import BasePlotFrame, PlotIcons
  24. from gui_core.toolbars import BaseToolbar, BaseIcons
  25. from wxplot.dialogs import ScatterRasterDialog, PlotStatsFrame
  26. from core.gcmd import RunCommand, GException, GError, GMessage
  27. from core.utils import _
  28. class ScatterFrame(BasePlotFrame):
  29. """Mainframe for displaying bivariate scatter plot of two raster maps. Uses wx.lib.plot.
  30. """
  31. def __init__(self, parent, id=wx.ID_ANY, style=wx.DEFAULT_FRAME_STYLE,
  32. size=wx.Size(700, 400),
  33. rasterList=[], **kwargs):
  34. BasePlotFrame.__init__(self, parent, size=size, **kwargs)
  35. self.toolbar = ScatterToolbar(parent=self)
  36. # workaround for http://trac.wxwidgets.org/ticket/13888
  37. if sys.platform != 'darwin':
  38. self.SetToolBar(self.toolbar)
  39. self.SetTitle(_("GRASS Bivariate Scatterplot Tool"))
  40. #
  41. # Init variables
  42. #
  43. self.rasterList = rasterList
  44. self.plottype = 'scatter'
  45. self.ptitle = _('Bivariate Scatterplot') # title of window
  46. self.xlabel = _("Raster cell values") # default X-axis label
  47. self.ylabel = _("Raster cell values") # default Y-axis label
  48. self.maptype = 'raster' # default type of scatterplot
  49. self.scattertype = 'normal'
  50. self.bins = 255
  51. self.colorList = [
  52. "blue",
  53. "red",
  54. "black",
  55. "green",
  56. "yellow",
  57. "magenta",
  58. "cyan",
  59. "aqua",
  60. "grey",
  61. "orange",
  62. "brown",
  63. "purple",
  64. "violet",
  65. "indigo"]
  66. self._initOpts()
  67. if len(
  68. self.rasterList) > 1: # set raster name(s) from layer manager if a map is selected
  69. self.InitRasterOpts(self.rasterList, 'scatter')
  70. else:
  71. self.raster = {}
  72. def _initOpts(self):
  73. """Initialize plot options
  74. """
  75. self.InitPlotOpts('scatter')
  76. def OnCreateScatter(self, event):
  77. """Main routine for creating a scatterplot. Uses r.stats to
  78. create a list of cell value pairs. This is passed to
  79. plot to create a scatterplot.
  80. """
  81. self.SetCursor(wx.StockCursor(wx.CURSOR_ARROW))
  82. self.SetGraphStyle()
  83. wx.BeginBusyCursor()
  84. wx.SafeYield()
  85. self.SetupScatterplot()
  86. p = self.CreatePlotList()
  87. if p:
  88. self.DrawPlot(p)
  89. wx.EndBusyCursor()
  90. else:
  91. wx.EndBusyCursor()
  92. GMessage(_("Nothing to plot."), parent=self)
  93. def OnSelectRaster(self, event):
  94. """Select raster map(s) to profile
  95. """
  96. dlg = ScatterRasterDialog(parent=self)
  97. dlg.CenterOnParent()
  98. if dlg.ShowModal() == wx.ID_OK:
  99. self.rasterList = dlg.GetRasterPairs()
  100. if not self.rasterList:
  101. GMessage(
  102. _("At least 2 raster maps must be specified"),
  103. parent=dlg)
  104. return
  105. # scatterplot or bubbleplot
  106. # bins for r.stats with float and dcell maps
  107. self.scattertype, self.bins = dlg.GetSettings()
  108. self.raster = self.InitRasterPairs(
  109. self.rasterList, 'scatter') # dictionary of raster pairs
  110. # plot histogram
  111. if self.rasterList:
  112. self.OnCreateScatter(event=None)
  113. dlg.Destroy()
  114. def SetupScatterplot(self):
  115. """Build data list for ploting each raster
  116. """
  117. #
  118. # initialize title string
  119. #
  120. self.ptitle = _('Bivariate Scatterplot of ')
  121. #
  122. # create a datalist for plotting for each raster pair
  123. #
  124. if len(self.rasterList) == 0:
  125. return # at least 1 pair of maps needed to plot
  126. for rpair in self.rasterList:
  127. self.raster[rpair]['datalist'] = self.CreateDatalist(rpair)
  128. # update title
  129. self.ptitle += '%s vs %s, ' % (
  130. rpair[0].split('@')[0],
  131. rpair[1].split('@')[0])
  132. self.ptitle = self.ptitle.strip(', ')
  133. #
  134. # set xlabel & ylabel based on raster maps of first pair to be plotted
  135. #
  136. self.xlabel = _('Raster <%s> cell values') % rpair[0].split('@')[0]
  137. self.ylabel = _('Raster <%s> cell values') % rpair[1].split('@')[0]
  138. units = self.raster[self.rasterList[0]][0]['units']
  139. if units != '':
  140. self.xlabel += _(': %s') % units
  141. units = self.raster[self.rasterList[0]][1]['units']
  142. if units != '':
  143. self.ylabel += _(': %s') % units
  144. def CreateDatalist(self, rpair):
  145. """Build a list of cell value, frequency pairs for histogram
  146. frequency can be in cell counts, percents, or area
  147. """
  148. datalist = []
  149. if self.scattertype == 'bubble':
  150. freqflag = 'cn'
  151. else:
  152. freqflag = 'n'
  153. try:
  154. ret = RunCommand("r.stats",
  155. parent=self,
  156. input='%s,%s' % rpair,
  157. flags=freqflag,
  158. nsteps=self.bins,
  159. sep=',',
  160. quiet=True,
  161. read=True)
  162. if not ret:
  163. return datalist
  164. for line in ret.splitlines():
  165. rast1, rast2 = line.strip().split(',')
  166. rast1 = rast1.strip()
  167. if '-' in rast1:
  168. if rast1[0] == '-':
  169. rast1 = '-' + rast1.split('-')[1]
  170. else:
  171. rast1 = rast1.split('-')[0]
  172. rast2 = rast2.strip()
  173. if '-' in rast2:
  174. if rast2[0] == '-':
  175. rast2 = '-' + rast2.split('-')[1]
  176. else:
  177. rast2 = rast2.split('-')[0]
  178. rast1 = rast1.encode('ascii', 'ignore')
  179. rast2 = rast2.encode('ascii', 'ignore')
  180. datalist.append((rast1, rast2))
  181. return datalist
  182. except GException as e:
  183. GError(parent=self,
  184. message=e.value)
  185. return None
  186. def CreatePlotList(self):
  187. """Make list of elements to plot
  188. """
  189. # graph the cell value, frequency pairs for the histogram
  190. self.plotlist = []
  191. for rpair in self.rasterList:
  192. if 'datalist' not in self.raster[rpair] or \
  193. self.raster[rpair]['datalist'] is None:
  194. continue
  195. if len(self.raster[rpair]['datalist']) > 0:
  196. col = wx.Colour(self.raster[rpair]['pcolor'][0],
  197. self.raster[rpair]['pcolor'][1],
  198. self.raster[rpair]['pcolor'][2],
  199. 255)
  200. scatterpoints = plot.PolyMarker(
  201. self.raster[rpair]['datalist'],
  202. legend=' ' + self.raster[rpair]['plegend'],
  203. colour=col, size=self.raster[rpair]['psize'],
  204. fillstyle=self.ptfilldict[self.raster[rpair]['pfill']],
  205. marker=self.raster[rpair]['ptype'])
  206. self.plotlist.append(scatterpoints)
  207. return self.plotlist
  208. def Update(self):
  209. """Update histogram after changing options
  210. """
  211. self.SetGraphStyle()
  212. p = self.CreatePlotList()
  213. if p:
  214. self.DrawPlot(p)
  215. else:
  216. GMessage(_("Nothing to plot."), parent=self)
  217. def OnRegression(self, event):
  218. """Displays regression information in messagebox
  219. """
  220. message = []
  221. title = _('Regression Statistics for Scatterplot(s)')
  222. for rpair in self.rasterList:
  223. if isinstance(rpair, tuple) == False:
  224. continue
  225. rast1, rast2 = rpair
  226. rast1 = rast1.split('@')[0]
  227. rast2 = rast2.split('@')[0]
  228. ret = grass.parse_command(
  229. 'r.regression.line', mapx=rast1, mapy=rast2, flags='g',
  230. quiet=True, parse=(grass.parse_key_val, {'sep': '='}))
  231. eqtitle = _('Regression equation for raster map <%(rast1)s> vs. <%(rast2)s>:\n\n') % {
  232. 'rast1': rast1, 'rast2': rast2}
  233. eq = ' %s = %s + %s(%s)\n\n' % (rast2, ret['a'], ret['b'], rast1)
  234. num = 'N = %s\n' % ret['N']
  235. rval = 'R = %s\n' % ret['R']
  236. rsq = 'R-squared = %f\n' % pow(float(ret['R']), 2)
  237. ftest = 'F = %s\n' % ret['F']
  238. str = eqtitle + eq + num + rval + rsq + ftest
  239. message.append(str)
  240. stats = PlotStatsFrame(self, id=wx.ID_ANY, message=message,
  241. title=title)
  242. if stats.Show() == wx.ID_CLOSE:
  243. stats.Destroy()
  244. class ScatterToolbar(BaseToolbar):
  245. """Toolbar for bivariate scatterplots of raster map pairs
  246. """
  247. def __init__(self, parent):
  248. BaseToolbar.__init__(self, parent)
  249. # workaround for http://trac.wxwidgets.org/ticket/13888
  250. if sys.platform == 'darwin':
  251. parent.SetToolBar(self)
  252. self.InitToolbar(self._toolbarData())
  253. # realize the toolbar
  254. self.Realize()
  255. def _toolbarData(self):
  256. """Toolbar data"""
  257. return self._getToolbarData((('addraster', BaseIcons["addRast"],
  258. self.parent.OnSelectRaster),
  259. (None, ),
  260. ('draw', PlotIcons["draw"],
  261. self.parent.OnCreateScatter),
  262. ('erase', BaseIcons["erase"],
  263. self.parent.OnErase),
  264. ('drag', BaseIcons['pan'],
  265. self.parent.OnDrag),
  266. ('zoom', BaseIcons['zoomIn'],
  267. self.parent.OnZoom),
  268. ('unzoom', BaseIcons['zoomBack'],
  269. self.parent.OnRedraw),
  270. (None, ),
  271. ('statistics', PlotIcons['statistics'],
  272. self.parent.OnRegression),
  273. ('image', BaseIcons["saveFile"],
  274. self.parent.SaveToFile),
  275. ('print', BaseIcons["print"],
  276. self.parent.PrintMenu),
  277. (None, ),
  278. ('settings', PlotIcons["options"],
  279. self.parent.PlotOptionsMenu),
  280. ('quit', PlotIcons["quit"],
  281. self.parent.OnQuit),
  282. ))