scatter.py 11 KB

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  1. """
  2. @package wxplot.scatter
  3. @brief Scatter plotting using PyPlot
  4. Classes:
  5. - scatter::ScatterFrame
  6. - scatter::ScatterToolbar
  7. (C) 2011 by the GRASS Development Team
  8. This program is free software under the GNU General Public License
  9. (>=v2). Read the file COPYING that comes with GRASS for details.
  10. @author Michael Barton, Arizona State University
  11. """
  12. import sys
  13. import wx
  14. try:
  15. import wx.lib.plot as plot
  16. except ImportError as e:
  17. print >> sys.stderr, e
  18. import grass.script as grass
  19. from wxplot.base import BasePlotFrame, PlotIcons
  20. from gui_core.toolbars import BaseToolbar, BaseIcons
  21. from wxplot.dialogs import ScatterRasterDialog, PlotStatsFrame
  22. from core.gcmd import RunCommand, GException, GError, GMessage
  23. from core.utils import _
  24. class ScatterFrame(BasePlotFrame):
  25. """Mainframe for displaying bivariate scatter plot of two raster maps. Uses wx.lib.plot.
  26. """
  27. def __init__(self, parent, id=wx.ID_ANY, style=wx.DEFAULT_FRAME_STYLE,
  28. size=wx.Size(700, 400),
  29. rasterList=[], **kwargs):
  30. BasePlotFrame.__init__(self, parent, size=size, **kwargs)
  31. self.toolbar = ScatterToolbar(parent=self)
  32. # workaround for http://trac.wxwidgets.org/ticket/13888
  33. if sys.platform != 'darwin':
  34. self.SetToolBar(self.toolbar)
  35. self.SetTitle(_("GRASS Bivariate Scatterplot Tool"))
  36. #
  37. # Init variables
  38. #
  39. self.rasterList = rasterList
  40. self.plottype = 'scatter'
  41. self.ptitle = _('Bivariate Scatterplot') # title of window
  42. self.xlabel = _("Raster cell values") # default X-axis label
  43. self.ylabel = _("Raster cell values") # default Y-axis label
  44. self.maptype = 'raster' # default type of scatterplot
  45. self.scattertype = 'normal'
  46. self.bins = 255
  47. self.colorList = [
  48. "blue",
  49. "red",
  50. "black",
  51. "green",
  52. "yellow",
  53. "magenta",
  54. "cyan",
  55. "aqua",
  56. "grey",
  57. "orange",
  58. "brown",
  59. "purple",
  60. "violet",
  61. "indigo"]
  62. self._initOpts()
  63. if len(
  64. self.rasterList) > 1: # set raster name(s) from layer manager if a map is selected
  65. self.InitRasterOpts(self.rasterList, 'scatter')
  66. else:
  67. self.raster = {}
  68. def _initOpts(self):
  69. """Initialize plot options
  70. """
  71. self.InitPlotOpts('scatter')
  72. def OnCreateScatter(self, event):
  73. """Main routine for creating a scatterplot. Uses r.stats to
  74. create a list of cell value pairs. This is passed to
  75. plot to create a scatterplot.
  76. """
  77. self.SetCursor(wx.StockCursor(wx.CURSOR_ARROW))
  78. self.SetGraphStyle()
  79. wx.BeginBusyCursor()
  80. wx.SafeYield()
  81. self.SetupScatterplot()
  82. p = self.CreatePlotList()
  83. if p:
  84. self.DrawPlot(p)
  85. wx.EndBusyCursor()
  86. else:
  87. wx.EndBusyCursor()
  88. GMessage(_("Nothing to plot."), parent=self)
  89. def OnSelectRaster(self, event):
  90. """Select raster map(s) to profile
  91. """
  92. dlg = ScatterRasterDialog(parent=self)
  93. dlg.CenterOnParent()
  94. if dlg.ShowModal() == wx.ID_OK:
  95. self.rasterList = dlg.GetRasterPairs()
  96. if not self.rasterList:
  97. GMessage(
  98. _("At least 2 raster maps must be specified"),
  99. parent=dlg)
  100. return
  101. # scatterplot or bubbleplot
  102. # bins for r.stats with float and dcell maps
  103. self.scattertype, self.bins = dlg.GetSettings()
  104. self.raster = self.InitRasterPairs(
  105. self.rasterList, 'scatter') # dictionary of raster pairs
  106. # plot histogram
  107. if self.rasterList:
  108. self.OnCreateScatter(event=None)
  109. dlg.Destroy()
  110. def SetupScatterplot(self):
  111. """Build data list for ploting each raster
  112. """
  113. #
  114. # initialize title string
  115. #
  116. self.ptitle = _('Bivariate Scatterplot of ')
  117. #
  118. # create a datalist for plotting for each raster pair
  119. #
  120. if len(self.rasterList) == 0:
  121. return # at least 1 pair of maps needed to plot
  122. for rpair in self.rasterList:
  123. self.raster[rpair]['datalist'] = self.CreateDatalist(rpair)
  124. # update title
  125. self.ptitle += '%s vs %s, ' % (
  126. rpair[0].split('@')[0],
  127. rpair[1].split('@')[0])
  128. self.ptitle = self.ptitle.strip(', ')
  129. #
  130. # set xlabel & ylabel based on raster maps of first pair to be plotted
  131. #
  132. self.xlabel = _('Raster <%s> cell values') % rpair[0].split('@')[0]
  133. self.ylabel = _('Raster <%s> cell values') % rpair[1].split('@')[0]
  134. units = self.raster[self.rasterList[0]][0]['units']
  135. if units != '':
  136. self.xlabel += _(': %s') % units
  137. units = self.raster[self.rasterList[0]][1]['units']
  138. if units != '':
  139. self.ylabel += _(': %s') % units
  140. def CreateDatalist(self, rpair):
  141. """Build a list of cell value, frequency pairs for histogram
  142. frequency can be in cell counts, percents, or area
  143. """
  144. datalist = []
  145. if self.scattertype == 'bubble':
  146. freqflag = 'cn'
  147. else:
  148. freqflag = 'n'
  149. try:
  150. ret = RunCommand("r.stats",
  151. parent=self,
  152. input='%s,%s' % rpair,
  153. flags=freqflag,
  154. nsteps=self.bins,
  155. sep=',',
  156. quiet=True,
  157. read=True)
  158. if not ret:
  159. return datalist
  160. for line in ret.splitlines():
  161. rast1, rast2 = line.strip().split(',')
  162. rast1 = rast1.strip()
  163. if '-' in rast1:
  164. if rast1[0] == '-':
  165. rast1 = '-' + rast1.split('-')[1]
  166. else:
  167. rast1 = rast1.split('-')[0]
  168. rast2 = rast2.strip()
  169. if '-' in rast2:
  170. if rast2[0] == '-':
  171. rast2 = '-' + rast2.split('-')[1]
  172. else:
  173. rast2 = rast2.split('-')[0]
  174. rast1 = rast1.encode('ascii', 'ignore')
  175. rast2 = rast2.encode('ascii', 'ignore')
  176. datalist.append((rast1, rast2))
  177. return datalist
  178. except GException as e:
  179. GError(parent=self,
  180. message=e.value)
  181. return None
  182. def CreatePlotList(self):
  183. """Make list of elements to plot
  184. """
  185. # graph the cell value, frequency pairs for the histogram
  186. self.plotlist = []
  187. for rpair in self.rasterList:
  188. if 'datalist' not in self.raster[rpair] or \
  189. self.raster[rpair]['datalist'] is None:
  190. continue
  191. if len(self.raster[rpair]['datalist']) > 0:
  192. col = wx.Colour(self.raster[rpair]['pcolor'][0],
  193. self.raster[rpair]['pcolor'][1],
  194. self.raster[rpair]['pcolor'][2],
  195. 255)
  196. scatterpoints = plot.PolyMarker(
  197. self.raster[rpair]['datalist'],
  198. legend=' ' + self.raster[rpair]['plegend'],
  199. colour=col, size=self.raster[rpair]['psize'],
  200. fillstyle=self.ptfilldict[self.raster[rpair]['pfill']],
  201. marker=self.raster[rpair]['ptype'])
  202. self.plotlist.append(scatterpoints)
  203. return self.plotlist
  204. def Update(self):
  205. """Update histogram after changing options
  206. """
  207. self.SetGraphStyle()
  208. p = self.CreatePlotList()
  209. if p:
  210. self.DrawPlot(p)
  211. else:
  212. GMessage(_("Nothing to plot."), parent=self)
  213. def OnRegression(self, event):
  214. """Displays regression information in messagebox
  215. """
  216. message = []
  217. title = _('Regression Statistics for Scatterplot(s)')
  218. for rpair in self.rasterList:
  219. if isinstance(rpair, tuple) == False:
  220. continue
  221. rast1, rast2 = rpair
  222. rast1 = rast1.split('@')[0]
  223. rast2 = rast2.split('@')[0]
  224. ret = grass.parse_command(
  225. 'r.regression.line', mapx=rast1, mapy=rast2, flags='g',
  226. quiet=True, parse=(grass.parse_key_val, {'sep': '='}))
  227. eqtitle = _('Regression equation for raster map <%(rast1)s> vs. <%(rast2)s>:\n\n') % {
  228. 'rast1': rast1, 'rast2': rast2}
  229. eq = ' %s = %s + %s(%s)\n\n' % (rast2, ret['a'], ret['b'], rast1)
  230. num = 'N = %s\n' % ret['N']
  231. rval = 'R = %s\n' % ret['R']
  232. rsq = 'R-squared = %f\n' % pow(float(ret['R']), 2)
  233. ftest = 'F = %s\n' % ret['F']
  234. str = eqtitle + eq + num + rval + rsq + ftest
  235. message.append(str)
  236. stats = PlotStatsFrame(self, id=wx.ID_ANY, message=message,
  237. title=title)
  238. if stats.Show() == wx.ID_CLOSE:
  239. stats.Destroy()
  240. class ScatterToolbar(BaseToolbar):
  241. """Toolbar for bivariate scatterplots of raster map pairs
  242. """
  243. def __init__(self, parent):
  244. BaseToolbar.__init__(self, parent)
  245. # workaround for http://trac.wxwidgets.org/ticket/13888
  246. if sys.platform == 'darwin':
  247. parent.SetToolBar(self)
  248. self.InitToolbar(self._toolbarData())
  249. # realize the toolbar
  250. self.Realize()
  251. def _toolbarData(self):
  252. """Toolbar data"""
  253. return self._getToolbarData((('addraster', BaseIcons["addRast"],
  254. self.parent.OnSelectRaster),
  255. (None, ),
  256. ('draw', PlotIcons["draw"],
  257. self.parent.OnCreateScatter),
  258. ('erase', BaseIcons["erase"],
  259. self.parent.OnErase),
  260. ('drag', BaseIcons['pan'],
  261. self.parent.OnDrag),
  262. ('zoom', BaseIcons['zoomIn'],
  263. self.parent.OnZoom),
  264. ('unzoom', BaseIcons['zoomBack'],
  265. self.parent.OnRedraw),
  266. (None, ),
  267. ('statistics', PlotIcons['statistics'],
  268. self.parent.OnRegression),
  269. ('image', BaseIcons["saveFile"],
  270. self.parent.SaveToFile),
  271. ('print', BaseIcons["print"],
  272. self.parent.PrintMenu),
  273. (None, ),
  274. ('settings', PlotIcons["options"],
  275. self.parent.PlotOptionsMenu),
  276. ('quit', PlotIcons["quit"],
  277. self.parent.OnQuit),
  278. ))