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@@ -252,7 +252,7 @@ with dag:
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'collection_type':'CELLRANGER_MULTI',
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'collection_name_task':'load_cellranger_result_to_db',
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'collection_name_key':'sample_igf_id',
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- 'metrics_summary_file':'count/metrics_summary.csv',
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+ 'metrics_summary_file':'metrics_summary.csv',
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'attribute_prefix':'CELLRANGER_COUNT'})
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load_scanpy_report_for_sc_5p_to_db = \
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PythonOperator(
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@@ -339,7 +339,7 @@ with dag:
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'collection_type':'CELLRANGER_MULTI',
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'collection_name_task':'load_cellranger_result_to_db',
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'collection_name_key':'sample_igf_id',
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- 'metrics_summary_file':'vdj_b/metrics_summary.csv',
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+ 'metrics_summary_file':'metrics_summary.csv',
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'attribute_prefix':'CELLRANGER_VDJB'})
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load_scirpy_report_for_vdj_b_to_db = \
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PythonOperator(
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@@ -412,7 +412,7 @@ with dag:
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'collection_type':'CELLRANGER_MULTI',
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'collection_name_task':'load_cellranger_result_to_db',
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'collection_name_key':'sample_igf_id',
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- 'metrics_summary_file':'vdj_t/metrics_summary.csv',
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+ 'metrics_summary_file':'metrics_summary.csv',
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'attribute_prefix':'CELLRANGER_VDJT'})
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load_scirpy_report_for_vdj_t_to_db = \
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PythonOperator(
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