|
|
@@ -46,6 +46,8 @@
|
|
|
"igf_lims_server_hostname": "igf-lims.cc.ic.ac.uk",
|
|
|
"tenx_single_cell_immune_profiling_feature_types": {"gene_expression": "", "vdj-t": "", "vdj-b": "", "antibody_capture": "", "antigen_capture": "", "crisper_guide_capture": ""},
|
|
|
"analysis_dag_list": {"dag9_tenx_single_cell_immune_profiling": "", "dag12_nextflow_chipseq_pipeline": "", "dag10_nextflow_atacseq_pipeline": ""},
|
|
|
+ "analysis_lookup_dir": "/project/tgu/data2/pipeline_control/analysis_designs",
|
|
|
+ "analysis_triger_file": "/project/tgu/data2/pipeline_control/analysis_trigger.csv",
|
|
|
"scanpy_single_sample_template": "/project/tgu/software/scanpy-notebook-image/templates/scanpy_single_sample_analysis_v0.0.6.ipynb",
|
|
|
"scvelo_single_sample_template": "/project/tgu/software/scanpy-notebook-image/templates/scvelo_basic_single_sample_v0.0.1.ipynb",
|
|
|
"scanpy_notebook_image": "/project/tgu/resources/pipeline_resource/singularity_images/scanpy-notebook-image/scanpy-notebook-image_v0.0.4.sif",
|
Avik Datta