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@@ -45,12 +45,12 @@
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"eliot_server_hostname": "eliot.med.ic.ac.uk",
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"igf_lims_server_hostname": "igf-lims.cc.ic.ac.uk",
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"tenx_single_cell_immune_profiling_feature_types": {"gene_expression": "", "vdj-t": "", "vdj-b": "", "antibody_capture": "", "antigen_capture": "", "crisper_guide_capture": ""},
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- "scanpy_single_sample_template": "/project/tgu/software/scanpy-notebook-image/templates/scanpy_single_sample_analysis_v0.0.5.2.ipynb",
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+ "scanpy_single_sample_template": "/project/tgu/software/scanpy-notebook-image/templates/scanpy_single_sample_analysis_v0.0.6.ipynb",
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"scvelo_single_sample_template": "/project/tgu/software/scanpy-notebook-image/templates/scvelo_basic_single_sample_v0.0.1.ipynb",
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"scanpy_notebook_image": "/project/tgu/resources/pipeline_resource/singularity_images/scanpy-notebook-image/scanpy-notebook-image_v0.0.4.sif",
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- "scirpy_single_sample_template": "/project/tgu/software/scirpy-notebook-image/templates/scirpy_basic_v0.0.3.1.ipynb",
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+ "scirpy_single_sample_template": "/project/tgu/software/scirpy-notebook-image/templates/scirpy_basic_v0.0.4.ipynb",
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"scirpy_notebook_image": "/project/tgu/resources/pipeline_resource/singularity_images/scirpy/scirpy-notebook-image_v0.0.2.sif",
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- "seurat_single_sample_template": "/project/tgu/software/seurat-notebook-image/templates/seurat_basic_v0.0.1.ipynb",
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+ "seurat_single_sample_template": "/project/tgu/software/seurat-notebook-image/templates/seurat_basic_v0.0.2.ipynb",
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"seurat_notebook_image": "/project/tgu/resources/pipeline_resource/singularity_images/seurat/seurat_release_v0.0.1.sif",
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"irods_exe_dir": "/apps/irods/4.2.0/irods/iRODS/clients/icommands/bin",
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"ftp_hostname": "eliot.med.ic.ac.uk",
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Avik Datta