|
@@ -243,7 +243,7 @@ with dag:
|
|
|
python_callable=load_cellranger_metrices_to_collection,
|
|
|
params={'cellranger_xcom_key':'cellranger_output',
|
|
|
'cellranger_xcom_pull_task':'run_cellranger',
|
|
|
- 'collection_type':'ANALYSIS_CRAM',
|
|
|
+ 'collection_type':'CELLRANGER_MULTI',
|
|
|
'collection_name_task':'load_cellranger_result_to_db',
|
|
|
'collection_name_key':'sample_igf_id',
|
|
|
'metrics_summary_file':'count/metrics_summary.csv',
|
|
@@ -330,7 +330,7 @@ with dag:
|
|
|
python_callable=load_cellranger_metrices_to_collection,
|
|
|
params={'cellranger_xcom_key':'cellranger_output',
|
|
|
'cellranger_xcom_pull_task':'run_cellranger',
|
|
|
- 'collection_type':'ANALYSIS_CRAM',
|
|
|
+ 'collection_type':'CELLRANGER_MULTI',
|
|
|
'collection_name_task':'load_cellranger_result_to_db',
|
|
|
'collection_name_key':'sample_igf_id',
|
|
|
'metrics_summary_file':'vdj/metrics_summary.csv',
|
|
@@ -403,7 +403,7 @@ with dag:
|
|
|
python_callable=load_cellranger_metrices_to_collection,
|
|
|
params={'cellranger_xcom_key':'cellranger_output',
|
|
|
'cellranger_xcom_pull_task':'run_cellranger',
|
|
|
- 'collection_type':'ANALYSIS_CRAM',
|
|
|
+ 'collection_type':'CELLRANGER_MULTI',
|
|
|
'collection_name_task':'load_cellranger_result_to_db',
|
|
|
'collection_name_key':'sample_igf_id',
|
|
|
'metrics_summary_file':'vdj_b/metrics_summary.csv',
|
|
@@ -476,7 +476,7 @@ with dag:
|
|
|
python_callable=load_cellranger_metrices_to_collection,
|
|
|
params={'cellranger_xcom_key':'cellranger_output',
|
|
|
'cellranger_xcom_pull_task':'run_cellranger',
|
|
|
- 'collection_type':'ANALYSIS_CRAM',
|
|
|
+ 'collection_type':'CELLRANGER_MULTI',
|
|
|
'collection_name_task':'load_cellranger_result_to_db',
|
|
|
'collection_name_key':'sample_igf_id',
|
|
|
'metrics_summary_file':'vdj_t/metrics_summary.csv',
|