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added analysis name for notebook run

Avik Datta 4 年 前
コミット
d3b1d04108
1 ファイル変更5 行追加0 行削除
  1. 5 0
      dags/dag9_tenx_single_cell_immune_profiling.py

+ 5 - 0
dags/dag9_tenx_single_cell_immune_profiling.py

@@ -216,6 +216,7 @@ with dag:
               'allow_errors':False,
               'kernel_name':'python3',
               'count_dir':'count',
+              'analysis_name':'scanpy',
               'output_notebook_key':'scanpy_notebook',
               'output_cellbrowser_key':'cellbrowser_dirs',
               'analysis_description_xcom_pull_task':'fetch_analysis_info',
@@ -284,6 +285,7 @@ with dag:
               'scanpy_timeout':1200,
               'allow_errors':False,
               'kernel_name':'python3',
+              'analysis_name':'scirpy',
               'vdj_dir':'vdj',
               'count_dir':'count',
               'output_notebook_key':'scirpy_notebook',
@@ -339,6 +341,7 @@ with dag:
               'scanpy_timeout':1200,
               'allow_errors':False,
               'kernel_name':'python3',
+              'analysis_name':'scirpy',
               'vdj_dir':'vdj_b',
               'count_dir':'count',
               'output_notebook_key':'scirpy_notebook',
@@ -394,6 +397,7 @@ with dag:
               'scanpy_timeout':1200,
               'allow_errors':False,
               'kernel_name':'python3',
+              'analysis_name':'scirpy',
               'vdj_dir':'vdj_t',
               'count_dir':'count',
               'output_notebook_key':'scirpy_notebook',
@@ -449,6 +453,7 @@ with dag:
               'scanpy_timeout':1200,
               'allow_errors':False,
               'kernel_name':'R',
+              'analysis_name':'seurat',
               'vdj_dir':'vdj',
               'count_dir':'count',
               'cell_marker_list':Variable.get('all_cell_marker_list'),