 Avik Datta
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1f24e57067
added samtools image path to var json
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4 éve |
|
Avik Datta
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998b77e9eb
fix for dag9 flow
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4 éve |
|
Avik Datta
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e5cb1168ed
change in temp dir settings
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4 éve |
|
Avik Datta
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b187bc603e
minor fix
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4 éve |
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Avik Datta
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c5024523b7
removed old func ref
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4 éve |
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Avik Datta
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aae6b81482
no deserialize_json
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4 éve |
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Avik Datta
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5bf9f83100
changed features to dictionary
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4 éve |
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Avik Datta
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6b1ca90b69
change pipeline status
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4 éve |
|
Avik Datta
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5876305ac2
passing task as list from variable
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4 éve |
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Avik Datta
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6be350c6b4
loading multiqc to ftp and box
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4 éve |
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Avik Datta
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21ebd05927
added bam copy for parallel picard runs
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4 éve |
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Avik Datta
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a5f0e62237
updated vars list
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4 éve |
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Avik Datta
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5e5d949444
added multiqc
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4 éve |
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Avik Datta
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bc31be2692
added samtools
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4 éve |
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Avik Datta
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f5f00d7a60
added picard tasks
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4 éve |
|
Avik Datta
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52d67d695b
irods upload
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4 éve |
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Avik Datta
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572c9d9367
bam2cram
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4 éve |
|
Avik Datta
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08701188b1
bam2cram
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4 éve |
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Avik Datta
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a681763c62
added box upload
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4 éve |
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Avik Datta
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d3b1d04108
added analysis name for notebook run
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4 éve |
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Avik Datta
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61916b78e1
removing redundant function from notebook run
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4 éve |
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Avik Datta
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0fb5301c99
converted dummy operators to python operators with null function
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4 éve |
|
Avik Datta
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60021a9b2e
changed task names
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4 éve |
|
Avik Datta
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543ac79c1a
reducing retries for failed job
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4 éve |
|
Avik Datta
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42f4527c6c
fix for task name
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4 éve |
|
Avik Datta
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9374e8fc6d
updated cellranger conf
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4 éve |
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Avik Datta
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1655888de3
trigger rule for last step
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4 éve |
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Avik Datta
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7dae94fa3e
trigger rule for config cellranger run
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4 éve |
|
Avik Datta
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fe82d8cc2f
added trigger rule for trim fastq collection branch
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4 éve |
|
Avik Datta
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f8e019ff53
branching to selected tasks
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4 éve |
