 Avik Datta
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b9d3f407b9
moving files download scripts to wells worker
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3 years ago |
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Avik Datta
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9b1e004709
added docker-compose.yml for new celery worker
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3 years ago |
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Avik Datta
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7552415204
added new dag for publication search and wiki update
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3 years ago |
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Avik Datta
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8c54f35c95
commented import
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3 years ago |
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Avik Datta
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5b19fb020a
added dir move cmds
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3 years ago |
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Avik Datta
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69b5bb635a
switching to old shell scripts
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3 years ago |
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Avik Datta
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fbf69ef354
downloading tar files directly on hpc
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3 years ago |
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Avik Datta
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4d29f38abf
added options for tar
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3 years ago |
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Avik Datta
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e45674f72a
added step for extracting run
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3 years ago |
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Avik Datta
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bd937298f6
more minor changes
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3 years ago |
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Avik Datta
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ae075a898c
minor changes
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3 years ago |
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Avik Datta
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e0afc15034
minor changes
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3 years ago |
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Avik Datta
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c82ed9fcfd
moved seqrun id to env
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3 years ago |
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Avik Datta
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5cbe6a088c
fixed missing import
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3 years ago |
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Avik Datta
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d79471d54e
minor changes for seqrun id fetching
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3 years ago |
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Avik Datta
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d092593b6a
removed ftp ping
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3 years ago |
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Avik Datta
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a9336b545f
running ping via ssh
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3 years ago |
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Avik Datta
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09fe734188
change in script path
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3 years ago |
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Avik Datta
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923dee7da4
minor changes
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3 years ago |
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Avik Datta
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45c57daa27
addeddag14
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3 years ago |
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Avik Datta
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c3d5c46efe
updated var
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3 years ago |
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Avik Datta
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d4d6234aaa
scvelo to collect scanpy h5ad from previous task
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3 years ago |
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Avik Datta
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595f9acef2
cleanup dag
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3 years ago |
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Avik Datta
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88423f7610
change of job class
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3 years ago |
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Avik Datta
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41e765526b
fix for scvelo large
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3 years ago |
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Avik Datta
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59564c6ebc
change of job class
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3 years ago |
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Avik Datta
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35d9965bf7
fix for box
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3 years ago |
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Avik Datta
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58acb0c391
updates for analysis page
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3 years ago |
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Avik Datta
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308dd40dd6
uploading rns velocity output files
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3 years ago |
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Avik Datta
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aca23afa3a
loading velocyto and scvelo output to rds and db
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3 years ago |
