 Avik Datta
|
be8a70ed8a
changed max runs for dag9
|
3 anni fa |
|
Avik Datta
|
1721e960b2
minor fix for task name
|
3 anni fa |
|
Avik Datta
|
730ec8c3ab
removed ambiguous vdj tasks
|
3 anni fa |
|
Avik Datta
|
8232c5df82
minor changes for matrics loading
|
4 anni fa |
|
Avik Datta
|
d820aa3612
trying backfill
|
4 anni fa |
|
Avik Datta
|
cf687c4ec4
addded cellranger matrics loading task
|
4 anni fa |
|
Avik Datta
|
e6d036cc8d
fix for picard rns metics bam cleanup
|
4 anni fa |
|
Avik Datta
|
b1a437dade
fix for temp dir
|
4 anni fa |
|
Avik Datta
|
32ff1447a7
fix for dataflow
|
4 anni fa |
|
Avik Datta
|
1f3f1a3ed9
fix for genome build fetching and html report loading
|
4 anni fa |
|
Avik Datta
|
bd1bfaa4ed
updating qc page
|
4 anni fa |
|
Avik Datta
|
f3dcc5287f
added temp file clean up and picard matrics upload to box
|
4 anni fa |
|
Avik Datta
|
18bb7190de
fix for R kernel name
|
4 anni fa |
|
Avik Datta
|
9a4e860c7d
fix for xcom pull task name
|
4 anni fa |
|
Avik Datta
|
5f7994f6cd
passing task name for collection name fetching
|
4 anni fa |
|
Avik Datta
|
9ed503db69
minor fix for dataflow
|
4 anni fa |
|
Avik Datta
|
4cd4c69e37
moved cram conversion before bam copy
|
4 anni fa |
|
Avik Datta
|
2c50862839
fix for picard input fetching
|
4 anni fa |
|
Avik Datta
|
998b77e9eb
fix for dag9 flow
|
4 anni fa |
|
Avik Datta
|
e5cb1168ed
change in temp dir settings
|
4 anni fa |
|
Avik Datta
|
b187bc603e
minor fix
|
4 anni fa |
|
Avik Datta
|
c5024523b7
removed old func ref
|
4 anni fa |
|
Avik Datta
|
aae6b81482
no deserialize_json
|
4 anni fa |
|
Avik Datta
|
5bf9f83100
changed features to dictionary
|
4 anni fa |
|
Avik Datta
|
6b1ca90b69
change pipeline status
|
4 anni fa |
|
Avik Datta
|
5876305ac2
passing task as list from variable
|
4 anni fa |
|
Avik Datta
|
6be350c6b4
loading multiqc to ftp and box
|
4 anni fa |
|
Avik Datta
|
21ebd05927
added bam copy for parallel picard runs
|
4 anni fa |
|
Avik Datta
|
5e5d949444
added multiqc
|
4 anni fa |
|
Avik Datta
|
bc31be2692
added samtools
|
4 anni fa |
