 Avik Datta
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c40f9b056d
fix for irods and box upload
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3 years ago |
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Avik Datta
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f3845e415d
minor changes
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3 years ago |
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Avik Datta
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9bdd9fd302
updated var file
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3 years ago |
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Avik Datta
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74987000ee
fix for param pool
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3 years ago |
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Avik Datta
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260fd8bfc7
fix for import
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3 years ago |
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Avik Datta
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2b05b2c5c5
copied task function to dag10
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3 years ago |
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Avik Datta
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e5f34c9dfa
test
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3 years ago |
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Avik Datta
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f36e2d8c35
uploading files to rds,irods and box
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3 years ago |
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Avik Datta
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107284b266
changed function name
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3 years ago |
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Avik Datta
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cdeaccf32b
updates
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3 years ago |
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Avik Datta
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9146f9db69
draft dag10
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3 years ago |
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Avik Datta
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1721e960b2
minor fix for task name
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4 years ago |
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Avik Datta
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730ec8c3ab
removed ambiguous vdj tasks
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4 years ago |
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Avik Datta
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a804aa9697
added new vars
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4 years ago |
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Avik Datta
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8232c5df82
minor changes for matrics loading
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4 years ago |
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Avik Datta
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d820aa3612
trying backfill
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4 years ago |
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Avik Datta
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cf687c4ec4
addded cellranger matrics loading task
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4 years ago |
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Avik Datta
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e6d036cc8d
fix for picard rns metics bam cleanup
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4 years ago |
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Avik Datta
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b1a437dade
fix for temp dir
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4 years ago |
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Avik Datta
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32ff1447a7
fix for dataflow
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4 years ago |
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Avik Datta
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1f3f1a3ed9
fix for genome build fetching and html report loading
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4 years ago |
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Avik Datta
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bd1bfaa4ed
updating qc page
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4 years ago |
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Avik Datta
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f3dcc5287f
added temp file clean up and picard matrics upload to box
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4 years ago |
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Avik Datta
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18bb7190de
fix for R kernel name
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4 years ago |
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Avik Datta
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9a4e860c7d
fix for xcom pull task name
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4 years ago |
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Avik Datta
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5f7994f6cd
passing task name for collection name fetching
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4 years ago |
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Avik Datta
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9ed503db69
minor fix for dataflow
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4 years ago |
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Avik Datta
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4cd4c69e37
moved cram conversion before bam copy
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4 years ago |
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Avik Datta
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2c50862839
fix for picard input fetching
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4 years ago |
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Avik Datta
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1f24e57067
added samtools image path to var json
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4 years ago |
