IGF-HPC-Airflow/dags/dag2_disk_usage.py

from datetime import timedelta

from airflow.models import DAG,Variable
from airflow.utils.dates import days_ago
from airflow.operators.bash_operator import BashOperator
from airflow.contrib.operators.ssh_operator import SSHOperator
from airflow.contrib.hooks.ssh_hook import SSHHook

default_args = {
    'owner': 'airflow',
    'depends_on_past': False,
    'start_date': days_ago(2),
    'email_on_failure': False,
    'email_on_retry': False,
    'retries': 1,
    'retry_delay': timedelta(minutes=5)
}

orwell_ssh_hook = \
  SSHHook(
    key_file=Variable.get('hpc_ssh_key_file'),
    username=Variable.get('hpc_user'),
    remote_host='orwell.hh.med.ic.ac.uk')

woolf_ssh_hook = \
  SSHHook(
    key_file=Variable.get('hpc_ssh_key_file'),
    username=Variable.get('hpc_user'),
    remote_host='woolf.med.ic.ac.uk')

eliot_ssh_hook = \
  SSHHook(
    key_file=Variable.get('hpc_ssh_key_file'),
    username=Variable.get('hpc_user'),
    remote_host='eliot.med.ic.ac.uk')

igf_lims_ssh_hook = \
  SSHHook(
    key_file=Variable.get('hpc_ssh_key_file'),
    username=Variable.get('hpc_user'),
    remote_host='igf-lims.cc.ic.ac.uk')

dag = \
  DAG(
    dag_id='dag2_disk_usage',
    schedule_interval="@hourly",
    max_active_runs=1,
    catchup=False,
    tags=['igf-lims','hpc','eliot','woolf','orwell'],
    default_args=default_args)

with dag:
  check_orwell_disk = \
    SSHOperator(
      task_id = 'check_orwell_disk',
      dag = dag,
      ssh_hook = orwell_ssh_hook,
      queue='hpc_4G',
      command = 'bash /home/igf/igf_code/IGF-cron-scripts/orwell/orwell_disk_usage.sh '
    )

  check_eliot_disk = \
    SSHOperator(
      task_id = 'check_eliot_disk',
      dag = dag,
      ssh_hook = eliot_ssh_hook,
      queue='hpc_4G',
      command = 'bash /home/igf/git_repos/IGF-cron-scripts/eliot/eliot_disk_usage.sh '
    )

  check_woolf_disk = \
    SSHOperator(
      task_id = 'check_woolf_disk',
      dag = dag,
      ssh_hook = woolf_ssh_hook,
      queue='hpc_4G',
      command = 'bash /home/igf/git_repos/IGF-cron-scripts/woolf/woolf_disk_usage.sh '
    )

  check_igf_lims_disk = \
    SSHOperator(
      task_id = 'check_igf_lims_disk',
      dag = dag,
      ssh_hook = igf_lims_ssh_hook,
      queue='hpc_4G',
      command = 'bash /home/igf/github/IGF-cron-scripts/igf_lims/igf_lims_disk_usage.sh '
    )

  merge_disk_usage = \
    SSHOperator(
      task_id = 'merge_disk_usage',
      dag = dag,
      ssh_hook = eliot_ssh_hook,
      queue='hpc_4G',
      command = 'bash /home/igf/git_repos/IGF-cron-scripts/eliot/merge_disk_usage.sh '
    )

  internal_usage = \
    SSHOperator(
      task_id = 'internal_usage',
      dag = dag,
      ssh_hook = eliot_ssh_hook,
      queue='hpc_4G',
      command = 'bash /home/igf/git_repos/IGF-cron-scripts/eliot/internal_usage.sh '
    )

  merge_disk_usage << [check_orwell_disk,check_eliot_disk,check_woolf_disk,check_igf_lims_disk]
  merge_disk_usage >> internal_usage